Gene omics information

Query gene ID	1614136_at
Gene name	hypothetical protein LOC100246668
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	80.6	1614136_at	CB347754	hypothetical protein LOC100246668	-	7e-55	At5g47670	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	S.X.	H.G.	Please select
0.89	95.5	1608743_at	CB348761	-	-	2e+0	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.88	95.4	1613470_at	BQ792870	hypothetical protein LOC100254431	-	7e-5	At5g07500	PEI1	S.X.	H.G.	Please select
0.80	93.6	1612730_at	CB349284	similar to seed specific protein Bn15D18B	-	2e+0	At4g33550	lipid binding	S.X.	H.G.	Please select
0.80	93.6	1616160_a_at	CB977336	hypothetical protein LOC100261550	-	6e-10	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	S.X.	H.G.	Please select
0.74	91.0	1620844_at	CB978855	hypothetical protein LOC100264473	-	3e-14	At5g50260	cysteine proteinase, putative	S.X.	H.G.	Please select
0.67	87.9	1618848_at	CB977336	hypothetical protein LOC100261550	-	6e-10	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	S.X.	H.G.	Please select
0.63	84.3	1608617_at	CB922233	hypothetical protein LOC100253171	-	9e-3	At3g55646	unknown protein	S.X.	H.G.	Please select
0.43	61.5	1617161_at	CB347813	hypothetical LOC100252186	-	5e-1	At4g21980	APG8A (AUTOPHAGY 8A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
76.1	100.0	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
32.4	100.0	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
26.7	100.0	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.3	99.7	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.4	99.6	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.1	98.7	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.3	98.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.1	98.1	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-4	46	1621148_at	CB003641	-	-	9e-30	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	C.G.	S.X.	Please select
0.04	1e-4	46	1617362_at	CF604794	hypothetical protein LOC100241538	-	9e-30	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	C.G.	S.X.	Please select
0.02	4e-1	34	1622302_s_at	CF207602	hypothetical protein LOC100245459	-	2e-19	At5g66570	PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)	C.G.	S.X.	Please select
0.03	4e-1	34	1621762_at	CF371697	hypothetical protein LOC100242812	-	6e-30	At3g55380	UBC14 (ubiquitin-conjugating enzyme 14)	C.G.	S.X.	Please select
0.03	4e-1	34	1612440_at	CF205292.1	-	-	9e-8	At4g11410	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.02	4e-1	34	1607630_at	CA808955	-	-	1e+0	At2g19340	membrane protein, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1622630_s_at	CF209498	hypothetical protein LOC100253858	-	1e-29	At2g41250	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.03	2e+0	32	1620084_at	CD721232	-	-	3e-26	At1g76850	SEC5A (EXOCYST COMPLEX COMPONENT SEC5)	C.G.	S.X.	Please select
0.03	2e+0	32	1617851_s_at	CF404370	hypothetical protein LOC100266313	-	1e+0	At4g36740	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	7e-55	214	Arabidopsis thaliana	At5g47670	834818	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	F:transcription activator binding, transcription factor activity, transcription activator activity;P:positive regulation of gene-specific transcription, regulation of transcription;C:nucleus, intracellular;MPFOA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	2e-71	270	Glycine max	Gma.10579.1.S1_at	BE822946	Clone se2.11d12 CCAAT-box binding factor HAP3 B domain	-	3e-36	At5g47670	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	C.G.	S.X.	Please select
0.06	7e-1	34	Hordeum vulgare	Contig12964_at	Contig12964	-	-	2e-10	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	C.G.	S.X.	Please select
0.19	5e-45	182	Oryza sativa	Os.8891.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.42	7e-65	248	Populus trichocarpa	PtpAffx.213117.1.S1_at	pmrna25668	hypothetical protein	-	1e-15	At1g21970	LEC1 (LEAFY COTYLEDON 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	2e+0	34	Triticum aestivum	Ta.4075.1.S1_s_at	BT009078.1	-	-	4e-11	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	C.G.	S.X.	Please select
0.15	3e-43	174	Zea mays	Zm.7340.1.S1_at	AF410176.1	leafy cotyledon1	-	1e-39	At5g47670	NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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