CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1614110_s_at

Gene name cullin 1

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.40 57.7 1614110_s_at CD801616 cullin 1 - 2e-19 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) S.X. H.G.
0.83 94.6 1619563_at CF514348 hypothetical protein LOC100255371 - 6e-3 At5g41770 crooked neck protein, putative / cell cycle protein, putative S.X. H.G.
0.73 90.8 1609694_at CB343060 similar to SNF2 domain-containing protein, putative, expressed - 1e-23 At1g08600 ATRX S.X. H.G.
0.61 83.2 1613432_at CF516959 hypothetical protein LOC100244217 - 1e-15 At1g67680 7S RNA binding S.X. H.G.
0.48 68.8 1611483_at CF207449 hypothetical protein LOC100253154 - 7e+0 Atmg00320 - S.X. H.G.
0.38 53.6 1615281_at CD800042 hypothetical protein LOC100241659 - 2e-17 At3g26560 ATP-dependent RNA helicase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.3 90.7 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436416 V. riparia (VR, PI588259) SD, 13h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436395 V. riparia (VR, PI588259) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 2654 1610863_at CD801616 cullin 1 - 2e-19 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.27 8e-69 260 1610315_at BQ792398 hypothetical protein LOC100261361 - 9e-21 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.01 5e-2 38 1608095_at CF211950 hypothetical protein LOC100259526 - 2e-32 At2g25910 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein C.G. S.X.
0.01 8e-1 34 1620974_at CA815987 hypothetical protein LOC100267239 - 4e-7 At5g51510 unknown protein C.G. S.X.
0.01 8e-1 34 1615285_at CF214268 hypothetical protein LOC100241959 - 7e-22 At2g18030 peptide methionine sulfoxide reductase family protein C.G. S.X.
0.01 8e-1 34 1610250_at CB344696 hypothetical protein LOC100242439 - 7e+0 At5g24790 unknown protein C.G. S.X.
0.01 8e-1 34 1609331_s_at CB344696 hypothetical protein LOC100242439 - 7e+0 At5g24790 unknown protein C.G. S.X.
0.02 8e-1 34 1608668_at BQ793206 - - 3e-1 At3g32904 unknown protein C.G. S.X.
0.01 3e+0 32 1622162_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-19 97 Arabidopsis thaliana At4g02570 825648 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. - - - C.G. S.X.
0.41 1e-114 414 Glycine max Gma.1936.1.S1_at AW348232 - - 4e-36 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.17 8e-36 151 Hordeum vulgare HK06B20r_s_at HK06B20r - - 1e+0 At1g44810 transcription regulator C.G. S.X.
0.10 9e-39 163 Oryza sativa Os05g0149600 AK073947.1 - Cullin 1 8e-30 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.47 0 678 Populus trichocarpa Ptp.2481.1.A1_s_at CV247386 hypothetical protein - 2e-28 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.21 2e-44 180 Triticum aestivum Ta.26817.1.A1_at CD491320 - - 3e-20 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
0.14 3e-44 178 Zea mays Zm.2548.1.A1_at AY106256.1 - - 2e-26 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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