Gene omics information

Query gene ID	1614028_at
Gene name	hypothetical protein LOC100259808
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	77.3	1614028_at	CB976052	hypothetical protein LOC100259808	-	1e-55	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	S.X.	H.G.	Please select
0.80	93.6	1606999_at	CF213738	hypothetical protein LOC100265295	-	3e-2	At5g04750	F1F0-ATPase inhibitor protein, putative	S.X.	H.G.	Please select
0.71	89.5	1611599_at	BQ797186	hypothetical protein LOC100250312	-	1e-1	At1g78190	unknown protein	S.X.	H.G.	Please select
0.71	89.5	1613813_a_at	CF517294	-	-	3e-11	At5g62000	ARF2 (AUXIN RESPONSE FACTOR 2)	S.X.	H.G.	Please select
0.60	81.9	1610968_at	BQ796931	similar to cysteine proteinase inhibitor	-	3e-11	At5g05110	cysteine protease inhibitor, putative / cystatin, putative	S.X.	H.G.	Please select
0.40	57.7	1618344_at	BQ796097	hypothetical protein LOC100266422	-	2e-5	At1g51160	synbindin, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	99.1	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.8	99.0	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.2	98.8	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.1	98.7	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.1	98.7	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.0	98.7	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.5	98.4	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	6e-18	89	1613557_at	BM436858	-	-	4e-66	At4g37640	ACA2 (CALCIUM ATPASE 2)	C.G.	S.X.	Please select
0.09	6e-18	89	1609778_at	BM436858	hypothetical protein LOC100262693	-	4e-66	At4g37640	ACA2 (CALCIUM ATPASE 2)	C.G.	S.X.	Please select
0.07	5e-9	59	1616662_at	CF404703	hypothetical protein LOC100254645	-	2e-34	At3g63380	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	C.G.	S.X.	Please select
0.02	1e+0	32	1620547_s_at	BQ796628	hypothetical protein LOC100263565	-	2e-24	At3g19970	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1619583_at	CK136907.1	hypothetical protein LOC100263565	-	2e-5	At3g19970	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1619345_s_at	BM436862	hypothetical protein LOC100262861	-	1e-4	At3g01500	CA1 (CARBONIC ANHYDRASE 1)	C.G.	S.X.	Please select
0.02	1e+0	32	1612279_at	BQ796628	hypothetical protein LOC100263565	-	2e-24	At3g19970	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1611508_at	CF514821	hypothetical protein LOC100250507	-	2e+0	At3g61200	thioesterase family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1610727_x_at	CK136907.1	-	-	2e-5	At3g19970	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	1e-55	216	Arabidopsis thaliana	At5g57110	835815	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.36	7e-92	337	Glycine max	Gma.541.1.S1_at	AW156279	-	-	5e-70	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	C.G.	S.X.	Please select
0.21	5e-32	137	Hordeum vulgare	Contig9475_at	Contig9475	-	-	1e-33	At4g29900	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)	C.G.	S.X.	Please select
0.32	1e-38	161	Oryza sativa	Os08g0517200	AK058787.1	-	Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)	1e-39	At4g29900	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	1e-84	313	Populus trichocarpa	PtpAffx.81470.1.S1_s_at	CV245113	autoinhibited calcium ATPase	-	1e-51	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	8e-14	77	Triticum aestivum	Ta.9178.1.S1_at	CD452861	-	-	7e-17	At4g29900	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)	C.G.	S.X.	Please select
0.32	3e-36	151	Zea mays	Zm.17277.1.S1_at	CF273093	-	-	1e-45	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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