Gene omics information

Query gene ID	1614010_at
Gene name	hypothetical LOC100246762
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	94.6	1614010_at	CF518977	hypothetical LOC100246762	-	4e+0	At1g60390	BURP domain-containing protein / polygalacturonase, putative	S.X.	H.G.	Please select
0.60	81.9	1607582_at	CB349344	hypothetical protein LOC100260114	-	1e+0	At2g23660	LBD10 (LOB DOMAIN-CONTAINING PROTEIN 10)	S.X.	H.G.	Please select
0.53	75.2	1609735_at	CF372575	hypothetical protein LOC100249713	-	1e-75	At1g50030	TOR (TARGET OF RAPAMYCIN)	S.X.	H.G.	Please select
0.50	72.7	1611177_at	CF518669	hypothetical protein LOC100263874	-	2e-8	At1g60200	splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.38	53.6	1612962_at	BQ794726	-	-	2e-2	At5g35530	40S ribosomal protein S3 (RPS3C)	S.X.	H.G.	Please select
0.26	32.0	1619919_at	CB913607	-	-	4e-1	At5g48880	PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.5	95.7	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	32	1617681_at	BQ797454	hypothetical protein LOC100250646	-	2e-17	At5g22370	QQT1 (QUATRE-QUART 1)	C.G.	S.X.	Please select
0.03	1e+0	32	1612864_at	CD713095	-	-	1e+0	At4g10925	F-box family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1609089_at	CD713095	-	-	1e+0	At4g10925	F-box family protein	C.G.	S.X.	Please select
0.03	5e+0	30	1622328_at	BQ792670	hypothetical protein LOC100264834	-	3e-32	At2g05310	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1621377_at	CB340584	hypothetical protein LOC100257000	-	2e-6	At2g31510	IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)	C.G.	S.X.	Please select
0.02	5e+0	30	1620784_at	CD011068	hypothetical protein LOC100240987	-	2e+0	At5g65410	HB25 (HOMEOBOX PROTEIN 25)	C.G.	S.X.	Please select
0.03	5e+0	30	1620402_at	CB977030	hypothetical protein LOC100243378	-	6e-3	At2g03350	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	1619808_at	CB972340	hypothetical LOC100257572	-	4e-8	At1g09510	cinnamyl-alcohol dehydrogenase family / CAD family	C.G.	S.X.	Please select
0.02	5e+0	30	1619073_at	CF206347.1	-	-	6e-34	At5g04140	GLU1 (GLUTAMATE SYNTHASE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At1g60390	842334	BURP domain-containing protein / polygalacturonase, putative	F:polygalacturonase activity;P:biological_process unknown;C:endomembrane system;OMBPFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.47491.1.S1_at	CA801949	-	-	9e-1	At3g45990	actin-depolymerizing factor, putative	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig6745_at	Contig6745	-	-	3e+0	At5g28950	unknown protein	C.G.	S.X.	Please select
0.05	1e-1	38	Oryza sativa	OsAffx.12854.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	Ptp.1173.1.A1_at	CK089675	-	-	2e+0	At2g44610	RAB6A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.128565.28.S1_x_at	CA735092	-	-	1e+1	At5g37740	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	4e-1	34	Zea mays	Zm.12557.1.A1_at	AI691470	-	-	3e+0	At3g01450	binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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