Gene omics information

Query gene ID	1613994_at
Gene name	hypothetical protein LOC100260766
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1613994_at	BQ794302	hypothetical protein LOC100260766	-	6e-21	At2g31090	unknown protein	S.X.	H.G.	Please select
0.53	75.2	1614591_at	CF216033	hypothetical protein LOC100254924	-	7e-19	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	S.X.	H.G.	Please select
0.50	72.7	1611449_at	CD797700	hypothetical protein LOC100251803	-	6e-9	At5g47710	C2 domain-containing protein	S.X.	H.G.	Please select
0.47	67.7	1613235_at	CF512455	hypothetical protein LOC100260767	-	1e-20	At1g17080	unknown protein	S.X.	H.G.	Please select
0.44	64.1	1621118_s_at	CD801405	hypothetical protein LOC100247365	-	9e+0	At2g27080	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	S.X.	H.G.	Please select
0.40	57.7	1619491_s_at	CF213714	hypothetical protein LOC100253896	-	2e-125	At5g17310	UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative	S.X.	H.G.	Please select
0.40	57.7	1607243_at	CD801288	hypothetical protein LOC100253217	-	4e-72	At2g25610	H+-transporting two-sector ATPase, C subunit family protein	S.X.	H.G.	Please select
0.37	51.7	1612872_at	CF414815	hypothetical protein LOC100243801	-	2e-8	At1g07140	SIRANBP	S.X.	H.G.	Please select
0.35	48.5	1620188_s_at	CF215897	hypothetical protein LOC100257968	-	3e-16	At4g20410	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	S.X.	H.G.	Please select
0.34	46.8	1610475_at	CB979928	hypothetical protein LOC100242577	-	1e-7	At4g20380	zinc finger protein (LSD1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.7	97.7	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.5	97.5	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.5	97.5	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.7	96.2	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-22	103	1614141_at	CA817693	hypothetical protein LOC100265131	-	1e-9	At2g31090	unknown protein	C.G.	S.X.	Please select
0.02	2e-2	38	1611572_at	CF373471	hypothetical protein LOC100255220	-	1e-1	At5g58530	glutaredoxin family protein	C.G.	S.X.	Please select
0.03	2e-2	38	1608412_at	CB913843	hypothetical protein LOC100242603	-	5e-3	At2g02100	LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)	C.G.	S.X.	Please select
0.03	9e-2	36	1618604_at	CF074734	-	-	3e-7	At1g32520	unknown protein	C.G.	S.X.	Please select
0.03	9e-2	36	1608824_at	CF589271	hypothetical protein LOC100250549	-	1e-15	At1g32520	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	1621452_at	CF514057	-	-	1e+0	At5g47060	senescence-associated protein-related	C.G.	S.X.	Please select
0.03	3e-1	34	1614419_at	CD719790	-	-	1e+0	At5g14200	3-isopropylmalate dehydrogenase, chloroplast, putative	C.G.	S.X.	Please select
0.02	3e-1	34	1613959_at	CB349085	hypothetical protein LOC100260703	-	4e-17	At5g53070	ribosomal protein L9 family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1612072_at	CD712676	-	-	3e-14	At2g16090	zinc finger protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	6e-21	101	Arabidopsis thaliana	At2g31090	817665	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.32	6e-34	145	Glycine max	GmaAffx.43537.1.S1_at	BQ786061	-	-	1e+0	At2g31090	unknown protein	C.G.	S.X.	Please select
0.12	1e-7	56	Hordeum vulgare	Contig7378_at	Contig7378	-	-	5e-1	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	C.G.	S.X.	Please select
0.11	2e-6	54	Oryza sativa	Os05g0209500	AK105188.1	-	Conserved hypothetical protein	5e+0	At5g48530	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.25	2e-21	103	Populus trichocarpa	PtpAffx.927.1.S1_at	CV225618	hypothetical protein	-	5e-3	At2g31090	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	5e-6	52	Triticum aestivum	Ta.954.1.S1_s_at	BE488880	-	-	2e+0	At5g59305	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.18459.1.S1_at	CO520549	histone-lysine N-methyltransferase SUVR3	-	6e+0	At3g32980	peroxidase 32 (PER32) (P32) (PRXR3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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