CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1613866_s_at

Gene name hypothetical protein LOC100245100

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.46 66.5 1613866_s_at CF510932 hypothetical protein LOC100245100 - 2e-68 At4g12590 unknown protein S.X. H.G.
0.67 87.9 1619551_at CF208204 hypothetical protein LOC100260697 - 9e-12 At4g08520 clathrin adaptor complex small chain family protein S.X. H.G.
0.61 83.2 1612305_at BQ797467 hypothetical protein LOC100263408 - 2e-12 At3g15660 GRX4 (GLUTAREDOXIN 4) S.X. H.G.
0.61 83.2 1609947_at BQ798098 hypothetical protein LOC100262722 - 6e-22 At2g25310 carbohydrate binding S.X. H.G.
0.55 77.3 1617347_at CB982365 hypothetical protein LOC100257949 - 7e-18 At3g05810 unknown protein S.X. H.G.
0.50 72.7 1618248_at CF514874 hypothetical protein LOC100250810 - 1e-19 At5g20180 ribosomal protein L36 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.2 GSM322362 genotype: Chardonnay - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.8 93.4 GSM322363 genotype: Chardonnay - disease type: Bois Noir infected - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.4 91.3 GSM322361 genotype: Chardonnay - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.2 89.9 GSM287903 Red soft berry A7 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.0 88.2 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0 88.2 GSM287902 Red soft berry C30 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
1.9 87.2 GSM287894 Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
1.9 87.2 GSM287873 Green hard berry B9 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
1.8 86.0 GSM287890 Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
1.8 86.0 GSM287869 Green hard berry C3 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 34 1621552_at BM437510 hypothetical protein LOC100249249 - 9e-27 At3g24500 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) C.G. S.X.
0.02 6e-1 34 1609161_at BQ796941 hypothetical protein LOC100257599 - 4e-3 At4g12590 unknown protein C.G. S.X.
0.02 3e+0 32 1622254_at CB341104 - - 2e-1 At2g33793 unknown protein C.G. S.X.
0.01 3e+0 32 1622116_at BQ793439 hypothetical protein LOC100264025 - 4e-2 At4g01895 systemic acquired resistance (SAR) regulator protein NIMIN-1-related C.G. S.X.
0.02 3e+0 32 1618511_at CF404182 hypothetical protein LOC100243219 - 1e-3 At1g67195 MIR414 (MICRORNA 414) C.G. S.X.
0.01 3e+0 32 1615839_at BQ798166 hypothetical protein LOC100247786 - 3e-9 At1g04300 - C.G. S.X.
0.01 1e+1 30 1621495_at CF515274 hypothetical protein LOC100259742 - 2e-7 At3g52720 ACA1 (ALPHA CARBONIC ANHYDRASE 1) C.G. S.X.
0.01 1e+1 30 1620946_a_at CB348039 hypothetical protein LOC100246409 - 1e-9 At5g51430 EYE (EMBRYO YELLOW) C.G. S.X.
0.01 1e+1 30 1619471_at BQ794353 hypothetical protein LOC100243217 - 1e-112 At3g46060 ATRAB8A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 2e-68 260 Arabidopsis thaliana At4g12590 826872 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, endoplasmic reticulum;MFOP - - - C.G. S.X.
0.51 2e-118 426 Glycine max Gma.8031.1.S1_at BE823105 - - 4e-76 At4g12590 unknown protein C.G. S.X.
0.32 2e-20 99 Hordeum vulgare Contig5182_at Contig5182 - - 9e-34 At4g12590 unknown protein C.G. S.X.
0.26 2e-14 81 Oryza sativa Os09g0497400 AK068677.1 - Eukaryotic protein of unknown function DUF850family protein 5e-32 At4g12590 unknown protein C.G. S.X.
0.43 6e-131 468 Populus trichocarpa PtpAffx.6864.1.S1_at CN550052 hypothetical protein - 2e-96 At4g12590 unknown protein C.G. S.X.
0.30 3e-21 103 Triticum aestivum Ta.6467.1.S1_a_at CK194906 - - 1e-35 At4g12590 unknown protein C.G. S.X.
0.34 2e-35 149 Zea mays Zm.7045.1.A1_at AY108667.1 protein pob - 2e-37 At4g12590 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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