Gene omics information

Query gene ID	1613809_at
Gene name	hypothetical protein LOC100247494
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.1	1613809_at	CF372821	hypothetical protein LOC100247494	-	3e-50	At1g69340	appr-1-p processing enzyme family protein	S.X.	H.G.	Please select
0.63	84.3	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	S.X.	H.G.	Please select
0.61	83.2	1615016_at	BQ794197	hypothetical protein LOC100241603	-	7e-2	At3g14480	glycine/proline-rich protein	S.X.	H.G.	Please select
0.47	67.7	1610114_at	CD003699	similar to SPla/RYanodine receptor (SPRY) domain-containing protein	-	8e+0	At5g51710	KEA5	S.X.	H.G.	Please select
0.39	54.9	1621155_at	BQ794745	hypothetical protein LOC100248478	-	8e-34	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	S.X.	H.G.	Please select
0.33	45.7	1620213_at	CB981229	hypothetical protein LOC100252268	-	5e-1	At1g13600	AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)	S.X.	H.G.	Please select
0.29	37.7	1606664_at	CF207540	hypothetical protein LOC100255704	-	2e-13	At1g70320	UPL2 (UBIQUITIN-PROTEIN LIGASE 2)	S.X.	H.G.	Please select
0.25	30.5	1618348_at	CF373264	hypothetical protein LOC100265921	-	1e-47	At5g45750	AtRABA1c (Arabidopsis Rab GTPase homolog A1c)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.0	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	32	1612946_at	CF510773	hypothetical protein LOC100244660	-	2e-18	At4g25360	-	C.G.	S.X.	Please select
0.03	1e+0	32	1608170_at	CD798362	hypothetical protein LOC100248761	-	2e-24	At1g04850	ubiquitin-associated (UBA)/TS-N domain-containing protein	C.G.	S.X.	Please select
0.03	5e+0	30	1621451_at	CD005813	-	-	5e+0	At3g23633	-	C.G.	S.X.	Please select
0.02	5e+0	30	1621363_at	CA809467	hypothetical protein LOC100250687	-	5e-4	At1g13080	CYP71B2 (CYTOCHROME P450 71B2)	C.G.	S.X.	Please select
0.03	5e+0	30	1620558_at	AY427121.1	-	-	2e-2	At4g16990	RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3)	C.G.	S.X.	Please select
0.03	5e+0	30	1619948_at	CB002696	-	-	2e-2	At5g03406	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	C.G.	S.X.	Please select
0.03	5e+0	30	1619552_at	CB979556	-	-	2e-1	At1g19530	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	1617146_at	CF205153.1	-	-	1e+0	At4g24060	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select
0.03	5e+0	30	1617228_at	CF517389	-	-	4e+0	At2g21500	protein binding / zinc ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	3e-50	198	Arabidopsis thaliana	At1g69340	843266	appr-1-p processing enzyme family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.33	3e-57	222	Glycine max	Gma.16294.1.S1_at	CD413154	-	-	1e-44	At1g69340	appr-1-p processing enzyme family protein	C.G.	S.X.	Please select
0.12	9e-15	79	Hordeum vulgare	Contig6740_at	Contig6740	-	-	1e-20	At1g69340	appr-1-p processing enzyme family protein	C.G.	S.X.	Please select
0.07	4e-14	79	Oryza sativa	Os.49567.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	1e-62	240	Populus trichocarpa	PtpAffx.209130.1.S1_at	pmrna18072	hypothetical protein	-	2e-121	At1g69340	appr-1-p processing enzyme family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	7e-8	57	Triticum aestivum	Ta.11312.1.A1_at	CK205967	-	-	1e+0	At2g41342	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.617.1.A1_at	AI715045	-	-	2e-1	At5g09600	SDH3-1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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