Gene omics information

Query gene ID 1613731_at
Gene name hypothetical protein LOC100248748
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.81613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)S.X.H.G.
0.7591.31606735_atCB970224hypothetical protein LOC100249353-4e+0At3g15420unknown proteinS.X.H.G.
0.7189.51615804_atCF403733--4e-2At5g65910BSD domain-containing proteinS.X.H.G.
0.6384.31613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3S.X.H.G.
0.6183.21619715_atCF207152hypothetical protein LOC100243011-5e-39At1g30470SIT4 phosphatase-associated family proteinS.X.H.G.
0.4464.11611870_atCF414975hypothetical protein LOC100247177-8e-152At5g09740HAM2 (histone acetyltransferase of the MYST family 2)S.X.H.G.
0.4260.11608671_atCF511645hypothetical protein LOC100243213-1e+0At5g65609unknown proteinS.X.H.G.
0.4057.71612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)S.X.H.G.
0.3853.61613769_atCB970019hypothetical protein LOC100265267-4e-48At1g51690ATB ALPHAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.088.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
2.088.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
2.088.2GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
1.987.2GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.987.2GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.987.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45
1.987.2GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.886.0GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.341e-411691606916_atCF202248.1--1e-1At3g10640VPS60.1C.G.S.X.
0.044e-4441614281_atCF513798--1e+0At2g1974060S ribosomal protein L31 (RPL31A)C.G.S.X.
0.039e-2361610083_atCB980605--2e+0At2g15450glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinC.G.S.X.
0.034e-1341615002_atCD713297--5e+0At5g25190ethylene-responsive element-binding protein, putativeC.G.S.X.
0.034e-1341611229_atCD713297--5e+0At5g25190ethylene-responsive element-binding protein, putativeC.G.S.X.
0.026e+0301622587_atCD801935hypothetical protein LOC100245491-6e-16At3g59050ATPAO3 (Polyamine oxidase 3)C.G.S.X.
0.026e+0301621741_atCF518837hypothetical protein LOC100247891-4e-1At2g05140phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family proteinC.G.S.X.
0.026e+0301621388_atCD798319hypothetical protein LOC100261405-2e+0At2g27390proline-rich family proteinC.G.S.X.
0.036e+0301620718_atCD801736hypothetical protein LOC100263189-3e+0At5g58784dehydrodolichyl diphosphate synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-550Arabidopsis thalianaAt5g63840836504RSW3 (RADIAL SWELLING 3)radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme.---C.G.S.X.
0.052e-654Glycine maxGma.6669.1.S1_atAI960146--2e-13At5g63840RSW3 (RADIAL SWELLING 3)C.G.S.X.
0.039e+030Hordeum vulgareHVSMEn0005O13f_x_atHVSMEn0005O13f--2e-1At2g17200ubiquitin family proteinC.G.S.X.
0.022e+034Oryza sativaOs02g0534800AK101459.1-40S ribosomal protein S14 (Clone MCH2)3e-67At3g1151040S ribosomal protein S14 (RPS14B)C.G.S.X.
0.196e-25115Populus trichocarpaPtpAffx.48310.1.A1_atCV282104hypothetical protein-1e-22At5g63840RSW3 (RADIAL SWELLING 3)C.G.S.X.
0.031e+034Triticum aestivumTaAffx.81543.1.S1_atCA684776--7e-1At1g76080CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD)C.G.S.X.
0.105e-444Zea maysZm.13759.2.A1_atCF627386hypothetical protein LOC100279293-7e-3At5g63840RSW3 (RADIAL SWELLING 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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