CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1613719_at

Gene name hypothetical protein LOC100253441

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1613719_at CF214562 hypothetical protein LOC100253441 - 5e-1 At3g50170 unknown protein S.X. H.G.
0.90 95.6 1610251_at CF213132 - - 4e+0 At5g65080 MAF5 (MADS AFFECTING FLOWERING 5) S.X. H.G.
0.89 95.5 1607667_at CF212686 hypothetical protein LOC100240808 - 3e-32 At5g01190 LAC10 (laccase 10) S.X. H.G.
0.85 94.9 1607960_at CF415350 hypothetical protein LOC100243780 - 3e-2 At4g20470 unknown protein S.X. H.G.
0.84 94.8 1622791_at CB973455 hypothetical protein LOC100241197 - 1e-40 At5g44030 CESA4 (CELLULOSE SYNTHASE A4) S.X. H.G.
0.83 94.6 1609391_s_at CF404650 hypothetical protein LOC100243780 - 3e+0 At5g09380 DNA-directed RNA polymerase III RPC4 family protein S.X. H.G.
0.81 93.7 1619612_at CF211611 hypothetical protein LOC100252178 - 4e+0 At5g25080 - S.X. H.G.
0.81 93.7 1610830_at CF213757 hypothetical protein LOC100263385 - 5e-10 At2g45820 DNA-binding protein, putative S.X. H.G.
0.76 91.5 1619519_at CB971445 hypothetical protein LOC100250171 - 1e+0 At4g37200 HCF164 S.X. H.G.
0.71 89.5 1619280_at CF211860 hypothetical protein LOC100261696 - 5e-15 At4g18780 IRX1 (IRREGULAR XYLEM 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.7 99.9 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
19.0 99.9 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
15.7 99.9 GSM436375 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
14.0 99.8 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
11.8 99.8 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
10.5 99.7 GSM436374 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
9.6 99.6 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.7 99.3 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.4 99.2 GSM436353 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.5 98.4 GSM436373 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 30 1609346_at CB342939 - - 9e-1 At4g03175 protein kinase family protein C.G. S.X.
0.02 9e+0 28 1622745_at BQ796736 hypothetical protein LOC100243616 /// hypothetical LOC100241452 /// hypothetical LOC100241972 - 4e-11 At5g54500 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) C.G. S.X.
0.03 9e+0 28 1620065_at CD798903 hypothetical protein LOC100257654 - 1e+0 At1g08980 AMI1 (AMIDASE 1) C.G. S.X.
0.03 9e+0 28 1619921_at CF371680 hypothetical protein LOC100245497 - 4e-7 At1g62640 KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III) C.G. S.X.
0.04 9e+0 28 1619196_at CB916796 - - 1e-15 At1g12070 Rho GDP-dissociation inhibitor family protein C.G. S.X.
0.03 9e+0 28 1618854_at CB344980 hypothetical protein LOC100258814 - 2e-15 At1g10510 emb2004 (embryo defective 2004) C.G. S.X.
0.02 9e+0 28 1618485_at CF510506 - - 7e-7 At2g01880 PAP7 (PURPLE ACID PHOSPHATASE 7) C.G. S.X.
0.04 9e+0 28 1616586_at CF201920.1 - - 1e+0 At5g60440 AGL62 (Agamous-like 62) C.G. S.X.
0.04 9e+0 28 1615377_at CB916796 hypothetical protein LOC100254819 - 1e-15 At1g12070 Rho GDP-dissociation inhibitor family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 34 Arabidopsis thaliana At3g50170 824179 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 1e+1 30 Glycine max GmaAffx.76494.3.A1_at BE659970 - - 2e-16 At1g24260 SEP3 (SEPALLATA3) C.G. S.X.
0.04 4e+0 30 Hordeum vulgare HA10E24r_at HA10E24r - - 1e+1 At4g18400 unknown protein C.G. S.X.
0.03 1e+1 30 Oryza sativa OsAffx.11653.1.S1_at - - - 0 C.G. S.X.
0.05 3e+0 32 Populus trichocarpa PtpAffx.27027.2.A1_at CV282321 hypothetical protein - 9e-10 At1g31812 ACBP6 (acyl-CoA-binding protein 6) C.G. S.X.
0.04 2e+0 32 Triticum aestivum Ta.5409.1.S1_x_at BJ269503 - - 4e+0 At5g16486 - C.G. S.X.
0.04 1e+1 28 Zea mays ZmAffx.1460.1.S1_at 11990232-27 - - 4e-73 Atcg00440 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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