Gene omics information

Query gene ID 1613712_at
Gene name hypothetical protein LOC100248230
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7189.51613712_atCF403703hypothetical protein LOC100248230-3e-9At2g37478CPuORF52 (Conserved peptide upstream open reading frame 52)S.X.H.G.
0.4260.11619706_atCD801487hypothetical protein LOC100255366-8e-18At5g52370unknown proteinS.X.H.G.
0.2632.01608288_atCD712676hypothetical protein LOC100257215-3e-14At2g16090zinc finger protein-relatedS.X.H.G.
0.2530.51618879_s_atCF373702hypothetical protein LOC100254193-7e-44At1g25682cell cycle control protein-relatedS.X.H.G.
0.2225.61612879_atBQ792341hypothetical protein LOC100260024-2e+0At5g02060integral membrane protein, putativeS.X.H.G.
0.2022.41612191_atCF208807hypothetical protein LOC100247661-2e-52At3g53090UPL7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.595.7GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.194.6GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
2.893.4GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.692.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
2.591.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.591.9GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
2.491.3GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
2.491.3GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
2.390.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-261191618712_atCB003306--3e-1At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)C.G.S.X.
0.132e-261191614914_atCB003306--3e-1At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)C.G.S.X.
0.142e-231091613010_atCF403543--4e+0At4g21890unknown proteinC.G.S.X.
0.132e-231091611923_atCA817577--3e-1At5g63740zinc finger protein-relatedC.G.S.X.
0.091e-14791616217_atCB003366--5e+0At4g13830J20 (DNAJ-LIKE 20)C.G.S.X.
0.091e-14791612410_atCB003366--5e+0At4g13830J20 (DNAJ-LIKE 20)C.G.S.X.
0.071e-14791611054_atCF516017--4e+0Atmg01290-C.G.S.X.
0.103e-12711613989_atCF414043--7e-1At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)C.G.S.X.
0.021e-2401618135_atCB973285hypothetical protein LOC100256203-1e-9At5g27670HTA7 (HISTONE H2A 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-963Arabidopsis thalianaAt2g374786240913CPuORF52 (Conserved peptide upstream open reading frame 52)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF52 represents a conserved upstream opening reading frame relative to major ORF AT2G37480.1---C.G.S.X.
0.112e-1481Glycine maxGmaAffx.85962.1.S1_atBE806647--2e-5At2g37478CPuORF52 (Conserved peptide upstream open reading frame 52)C.G.S.X.
0.021e+034Hordeum vulgareHVSMEc0013C02f_atHVSMEc0013C02f--4e+0At4g33666unknown proteinC.G.S.X.
0.031e+036Oryza sativaOs06g05997009634.m03815--2e+0At5g23100unknown proteinC.G.S.X.
0.021e-242Populus trichocarpaPtpAffx.75617.1.S1_atCV263227hypothetical protein-2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
0.023e+034Triticum aestivumTaAffx.107156.1.S1_atCA705156--8e-1At2g31670-C.G.S.X.
0.024e+032Zea maysZm.9689.1.A1_atBM335695plant integral membrane protein TIGR01569 containing protein-1e+0At3g43153cAMP-dependent protein kinase inhibitor-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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