Gene omics information

Query gene ID	1613687_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1613687_at	CD713993	-	-	4e+0	At4g01590	unknown protein	S.X.	H.G.	Please select
0.11	11.3	1612344_at	CF209694	-	-	4e-1	At4g04632	ATP binding / protein kinase	S.X.	H.G.	Please select
0.11	11.3	1613744_at	CF203248.1	-	-	3e-1	At2g18210	unknown protein	S.X.	H.G.	Please select
0.04	5.2	1613146_at	BQ799294	-	-	7e-2	At2g33410	heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative	S.X.	H.G.	Please select
0.02	3.2	1622240_x_at	CF202008.1	-	-	7e+0	At5g37580	-	S.X.	H.G.	Please select
0.00	0.5	1622075_at	CD799862	-	-	2e-16	At5g20990	B73	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	99.6	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
8.2	99.4	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
6.9	99.1	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
6.7	99.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
6.2	98.8	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
5.5	98.4	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
5.1	98.1	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
4.3	97.2	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.90	6e-132	468	1609895_at	CD713993	-	-	4e+0	At4g01590	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	1609279_at	CA818707	-	-	1e+0	At1g31750	proline-rich family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1620599_at	CF414825	hypothetical protein LOC100246051 /// hypothetical protein LOC100256250	-	5e+0	At5g20290	40S ribosomal protein S8 (RPS8A)	C.G.	S.X.	Please select
0.04	1e+0	32	1616790_at	CD798657	-	-	3e+0	At5g54590	protein kinase family protein	C.G.	S.X.	Please select
0.04	1e+0	32	1609163_at	CD004634	hypothetical protein LOC100251093	-	4e+0	At5g45970	ARAC2 (ARABIDOPSIS RAC-LIKE 2)	C.G.	S.X.	Please select
0.03	4e+0	30	1621916_at	CB974873	-	-	6e+0	At5g45550	mob1/phocein family protein	C.G.	S.X.	Please select
0.03	4e+0	30	1621713_at	CF514756	-	-	2e-1	At5g57815	cytochrome c oxidase subunit 6b, putative	C.G.	S.X.	Please select
0.02	4e+0	30	1621584_at	CF203397.1	-	-	2e+0	At2g33870	ArRABA1h (Arabidopsis Rab GTPase homolog A1h)	C.G.	S.X.	Please select
0.03	4e+0	30	1620909_at	CB979931	-	-	1e+0	At3g16240	DELTA-TIP	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At4g01590	828101	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.61518.1.A1_at	CD414508	-	-	7e-1	At5g55690	MADS-box protein (AGL47)	C.G.	S.X.	Please select
0.05	2e+0	32	Hordeum vulgare	HVSMEh0101N10f_at	HVSMEh0101N10f	-	-	3e-1	At2g04066	MATE efflux protein-related	C.G.	S.X.	Please select
Os12g0297350	0.04	7e+0	Oryza sativa	Os08g0306501	9636.m02101	-	-	3e+0	At5g18690	AGP25 (ARABINOGALACTAN PROTEINS 25)	C.G.	S.X.	Please select
0.03	1e+0	34	Populus trichocarpa	PtpAffx.140955.1.A1_at	CV233539	hypothetical protein	-	2e-21	At1g21740	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.29945.1.S1_at	CA632028	-	-	4e+0	At2g42955	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	Zm.5961.1.S1_at	AI665954	-	-	3e+0	At2g24970	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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