Gene omics information

Query gene ID	1613683_at
Gene name	hypothetical protein LOC100255739
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	90.8	1613683_at	CB976586	hypothetical protein LOC100255739	-	7e-15	At1g47560	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1609434_at	CF211782	hypothetical protein LOC100240790	-	1e-41	At3g42050	vacuolar ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.50	72.7	1620593_at	BQ797219	hypothetical protein LOC100252659	-	1e-97	At1g30580	GTP binding	S.X.	H.G.	Please select
0.46	66.5	1620819_at	BQ797308	hypothetical protein LOC100244100	-	1e-135	At1g54270	EIF4A-2	S.X.	H.G.	Please select
0.43	61.5	1616080_at	CF511120	hypothetical protein LOC100254062	-	5e-13	At5g42970	COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)	S.X.	H.G.	Please select
0.29	37.7	1612642_at	CB970994	hypothetical protein LOC100244706	-	5e+0	At3g43570	GDSL-motif lipase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.6	96.0	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e-1	34	1617758_at	CD007413	-	-	1e+0	At2g20820	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	1616864_x_at	CF203744.1	-	-	1e+1	At5g63400	ADK1 (ADENYLATE KINASE 1)	C.G.	S.X.	Please select
0.02	4e-1	34	1616702_at	CD720783	-	-	0	Atcg00190	-	C.G.	S.X.	Please select
0.02	4e-1	34	1613949_at	CD007413	-	-	1e+0	At2g20820	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	1608161_at	CF203744.1	-	-	1e+1	At5g63400	ADK1 (ADENYLATE KINASE 1)	C.G.	S.X.	Please select
0.02	2e+0	32	1618736_at	CB920638	hypothetical protein LOC100266614	-	2e-5	At2g02360	AtPP2-B10 (Phloem protein 2-B10)	C.G.	S.X.	Please select
0.02	2e+0	32	1614574_at	CF206733.1	-	-	3e-5	At2g37210	-	C.G.	S.X.	Please select
0.02	2e+0	32	1612838_at	CB349282	-	-	3e-1	At5g40451	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611686_at	CB969423	hypothetical protein LOC100255085	-	7e+0	At5g26080	proline-rich family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	7e-15	81	Arabidopsis thaliana	At1g47560	841165	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.48	2e-53	210	Glycine max	Gma.8259.1.S1_at	BU549783	-	-	2e-48	At1g47550	unknown protein	C.G.	S.X.	Please select
0.06	2e-7	56	Hordeum vulgare	Contig7401_at	Contig7401	-	-	1e-28	At1g47550	unknown protein	C.G.	S.X.	Please select
0.05	3e-6	54	Oryza sativa	Os03g0625700	AY224571.1	-	Conserved hypothetical protein	4e-14	At1g47550	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.43	7e-68	258	Populus trichocarpa	Ptp.4480.1.S1_at	DN484856	hypothetical protein	-	1e-65	At1g47550	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	2e-8	59	Triticum aestivum	Ta.26577.1.A1_at	CD491250	-	-	1e+0	At5g01520	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	Zm.11965.1.A1_at	BM382230	hypothetical protein LOC100275559	-	2e+0	At1g06070	bZIP transcription factor, putative (bZIP69)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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