Gene omics information

Query gene ID	1613573_at
Gene name	hypothetical protein LOC100260045
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	94.6	1613573_at	CF609267	hypothetical protein LOC100260045	-	6e-33	At1g53860	remorin family protein	S.X.	H.G.	Please select
0.92	99.0	1611748_s_at	CB969590	similar to PDF	-	1e-1	At2g42840	PDF1 (PROTODERMAL FACTOR 1)	S.X.	H.G.	Please select
0.86	95.1	1609418_s_at	CF568955	hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538	-	4e+0	At5g35375	unknown protein	S.X.	H.G.	Please select
0.86	95.1	1613074_at	CB969590	similar to PDF	-	1e-1	At2g42840	PDF1 (PROTODERMAL FACTOR 1)	S.X.	H.G.	Please select
0.85	94.9	1607851_at	CF415102	hypothetical protein LOC100266538	-	9e-2	At1g04660	glycine-rich protein	S.X.	H.G.	Please select
0.79	92.7	1617280_s_at	CF373668	hypothetical protein LOC100258720	-	5e-3	At2g27385	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1609703_at	CF213302	similar to homeodomain protein ARBORKNOX1	-	2e-43	At1g62360	STM (SHOOT MERISTEMLESS)	S.X.	H.G.	Please select
0.67	87.9	1615124_at	CF514122	hypothetical protein LOC100258563	-	8e-5	At1g71691	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.64	84.7	1621559_at	CF415172	hypothetical protein LOC100262734	-	3e-51	At3g28860	ABCB19	S.X.	H.G.	Please select
0.61	83.2	1619772_at	CF205273.1	hypothetical protein LOC100260458	-	2e+0	At3g05070	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.5	99.2	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
7.2	99.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.8	98.6	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.9	97.9	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.8	97.8	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.4	97.3	GSM436359	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-3	40	1620877_at	CF607766	hypothetical protein LOC100258862	-	4e-5	At5g66320	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.02	5e-3	40	1620596_at	BQ797727	hypothetical protein LOC100259534	-	5e-174	At5g44340	TUB4	C.G.	S.X.	Please select
0.03	5e-3	40	1608279_at	CB001634	-	-	4e-5	At5g66320	zinc finger (GATA type) family protein	C.G.	S.X.	Please select
0.02	2e-2	38	1617988_at	CA817224	hypothetical protein LOC100243747	-	2e-4	At2g35410	33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative	C.G.	S.X.	Please select
0.03	2e-2	38	1617820_at	CB980056	hypothetical protein LOC100257155	-	8e-2	At4g20470	unknown protein	C.G.	S.X.	Please select
0.03	2e-2	38	1607495_at	CF607413	hypothetical protein LOC100264093	-	3e-17	At4g34160	CYCD3	C.G.	S.X.	Please select
0.04	7e-2	36	1621823_at	CF214240	hypothetical protein LOC100253216	-	4e+0	At5g66000	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	36	1614779_s_at	CA816737	hypothetical protein LOC100253707	-	4e-8	At3g57540	remorin family protein	C.G.	S.X.	Please select
0.02	7e-2	36	1612320_a_at	BE846422	hypothetical protein LOC100255913	-	3e-163	At4g14960	TUA6	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	6e-33	141	Arabidopsis thaliana	At1g53860	841823	remorin family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMOFBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	9e-2	38	Glycine max	HgAffx.11331.1.A1_at	CK348594	-	-	3e+0	At1g12080	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Hordeum vulgare	Contig24413_at	Contig24413	-	-	1e+1	At5g23411	unknown protein	C.G.	S.X.	Please select
0.10	2e-12	73	Oryza sativa	Os11g0616300	AK103590.1	-	Remorin, C-terminal region domain containingprotein	4e-6	At1g53860	remorin family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	9e-45	180	Populus trichocarpa	PtpAffx.217052.1.S1_at	pmrna32175	hypothetical protein	-	4e-30	At1g53860	remorin family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-2	40	Triticum aestivum	TaAffx.5357.1.S1_at	CA713422	-	-	5e-1	At2g23320	WRKY15	C.G.	S.X.	Please select
0.04	3e-2	38	Zea mays	Zm.11659.1.S1_s_at	BM379730	hypothetical protein LOC100274758	-	6e-2	At2g24550	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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