CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1613521_at

Gene name metallothionein

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1613521_at CF514518 metallothionein - 5e-19 At3g09390 MT2A (METALLOTHIONEIN 2A) S.X. H.G.
0.63 84.3 1607049_s_at CF514518 metallothionein - 5e-19 At3g09390 MT2A (METALLOTHIONEIN 2A) S.X. H.G.
0.28 37.7 1621583_at CF404733 hypothetical protein LOC100266937 - 3e-12 At1g05850 POM1 (POM-POM1) S.X. H.G.
0.27 34.0 1607928_at CF201793.1 - - 5e-3 At4g08230 glycine-rich protein S.X. H.G.
0.20 22.4 1607580_s_at AF501624.1 similar to histone H3 /// similar to histone H3 - 6e-87 At4g40040 histone H3.2 S.X. H.G.
0.18 19.4 1609966_a_at BQ798735 hypothetical protein LOC100249980 /// hypothetical protein LOC100245503 - 3e-1 At3g01090 AKIN10 (Arabidopsis SNF1 kinase homolog 10) S.X. H.G.
0.17 18.2 1615754_at CF213398 - - 3e-41 At5g65470 unknown protein S.X. H.G.
0.09 9.4 1616840_at CF608637 hypothetical protein LOC100255499 - 9e-15 At1g09140 SF2/ASF-like splicing modulator (SRP30) S.X. H.G.
0.08 8.5 1615991_s_at CF404409 hypothetical protein LOC100241833 - 1e-22 At4g38130 HD1 (HISTONE DEACETYLASE 1) S.X. H.G.
0.08 8.5 1612757_at CD801743 hypothetical protein LOC100241266 - 1e+0 At2g32560 F-box family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.2 94.9 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436392 V. riparia (VR, PI588259) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.86 0 1043 1607049_s_at CF514518 metallothionein - 5e-19 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
0.19 2e-31 135 1621429_at CB971575 - - 1e+0 At5g60560 F-box family protein C.G. S.X.
0.31 1e-22 105 1611130_at CB345470 - - 3e+0 At5g55330 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related C.G. S.X.
0.07 3e-5 48 1615445_at BQ794327 - - 5e-3 At5g02380 MT2B (METALLOTHIONEIN 2B) C.G. S.X.
0.12 4e-1 34 1613544_at CF204383.1 - - 2e+0 At3g24020 disease resistance-responsive family protein C.G. S.X.
0.12 4e-1 34 1609698_x_at CF204383.1 - - 2e+0 At3g24020 disease resistance-responsive family protein C.G. S.X.
0.02 2e+0 32 1619433_at CD717897 - - 7e-49 At5g25220 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) C.G. S.X.
0.02 2e+0 32 1615625_at CD717897 hypothetical protein LOC100254363 - 7e-49 At5g25220 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3) C.G. S.X.
0.02 2e+0 32 1614507_at CF373139 hypothetical protein LOC100250082 - 5e-1 At5g12300 C2 domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 5e-19 95 Arabidopsis thaliana At3g09390 820098 MT2A (METALLOTHIONEIN 2A) metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage - - - C.G. S.X.
0.11 2e-9 63 Glycine max GmaAffx.93164.1.S1_s_at CF808889 - - 6e-9 At5g02380 MT2B (METALLOTHIONEIN 2B) C.G. S.X.
0.11 2e-7 56 Hordeum vulgare Contig402_s_at Contig402 - - 3e-7 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
0.10 9e-19 95 Oryza sativa Os01g0149200 AK069318.1 - Metallothionein-like protein type 2 5e-7 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
0.24 6e-10 65 Populus trichocarpa Ptp.2257.3.S1_x_at CV278949 hypothetical protein - 8e-6 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
0.10 2e-12 73 Triticum aestivum Ta.28695.1.S1_x_at CA598547 Metallothionein - 1e-18 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
0.11 4e-8 57 Zea mays Zm.1356.3.A1_at AY109343.1 - - 7e-3 At3g09390 MT2A (METALLOTHIONEIN 2A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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