Gene omics information

Query gene ID 1613489_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7390.81613489_atCF403663--5e+0At3g25572CPuORF11 (Conserved peptide upstream open reading frame 11)S.X.H.G.
0.5375.21615702_atBQ797006hypothetical protein LOC100268087-4e-5At1g17980nucleotidyltransferase family proteinS.X.H.G.
0.5072.71620419_atBQ794848hypothetical protein LOC100241492-5e-1At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)S.X.H.G.
0.4767.71615929_atCB970992hypothetical protein LOC100246610-7e-16At5g49580DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.3548.51617244_s_atCB341989hypothetical protein LOC100262315-1e-23At4g22150PUX3S.X.H.G.
0.3141.31619248_atCA813733hypothetical protein LOC100264750-3e-1At5g18100CSD3 (copper/zinc superoxide dismutase 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.194.6GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.793.0GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.793.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+0321616206_atCF209353--1e+0At2g14935LCR40 (Low-molecular-weight cysteine-rich 40)C.G.S.X.
0.046e+0301618873_atCB980637hypothetical protein LOC100264953-1e+0At3g05685-C.G.S.X.
0.036e+0301615479_atCA815857hypothetical protein LOC100250632-2e-5At1g26690emp24/gp25L/p24 family proteinC.G.S.X.
0.026e+0301613758_atCA817514hypothetical protein LOC100261013-4e-32At5g63670SPT42 (SPT4 HOMOLOG 2)C.G.S.X.
0.026e+0301613511_atBQ796246hypothetical protein LOC100251492-4e-1At2g45630oxidoreductase family proteinC.G.S.X.
0.036e+0301613624_atCB970090--1e+0At5g15670F-box family proteinC.G.S.X.
0.016e+0301612370_atCB974818hypothetical protein LOC100252199-1e-46At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.026e+0301611113_atCF215815hypothetical protein LOC100262993-8e-15At4g06599ubiquitin family proteinC.G.S.X.
0.026e+0301610335_s_atCF511082hypothetical protein LOC100257917-7e-6At4g14300heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Arabidopsis thalianaAt3g255726241080CPuORF11 (Conserved peptide upstream open reading frame 11)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF11 represents a conserved upstream opening reading frame relative to major ORF AT3G25570.1---C.G.S.X.
0.034e-136Glycine maxHgAffx.23127.1.S1_atBF014722--4e+0At5g18790ribosomal protein L33 family proteinC.G.S.X.
0.032e+032Hordeum vulgareHVSMEn0015O15f_s_atHVSMEn0015O15f--1e-3At1g64060ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)C.G.S.X.
0.041e+132Oryza sativaOs01g0735566NM_191563.1--2e+0At3g25572CPuORF11 (Conserved peptide upstream open reading frame 11)C.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.85968.1.S1_atCV243582hypothetical protein-3e-6At4g24560UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16)C.G.S.X.
0.031e+034Triticum aestivumTa.1776.2.A1_a_atBJ244531--3e+0At5g23350GRAM domain-containing protein / ABA-responsive protein-relatedC.G.S.X.
0.042e+032Zea maysZm.12143.1.S1_atBI358874--2e+0At5g55560protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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