Gene omics information

Query gene ID	1613468_at
Gene name	hypothetical protein LOC100250231
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.1	1613468_at	CF405048	hypothetical protein LOC100250231	-	3e-55	At3g04730	IAA16	S.X.	H.G.	Please select
0.67	87.9	1617158_at	CB920605	hypothetical protein LOC100251931	-	4e-17	At5g19630	unknown protein	S.X.	H.G.	Please select
0.55	77.3	1612088_at	CF403659	hypothetical protein LOC100252369	-	6e-1	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.50	72.7	1618481_at	CF213085	hypothetical protein LOC100266840	-	1e-13	At1g65320	CBS domain-containing protein	S.X.	H.G.	Please select
0.40	57.7	1606933_a_at	CB007886	-	-	1e-20	At1g01360	unknown protein	S.X.	H.G.	Please select
0.38	53.6	1619736_at	CF210461	hypothetical protein LOC100241098	-	3e-30	At5g04460	protein binding / zinc ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.8	96.4	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.5	91.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.4	91.3	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.3	90.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.3	90.7	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.3	90.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	3e-77	287	1610970_at	CB343978	-	-	1e-63	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.26	6e-60	230	1619741_at	CB339880	hypothetical protein LOC100259693	-	4e-50	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.12	2e-32	139	1611489_at	CF516497	hypothetical protein LOC100254530	-	3e-17	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.12	2e-32	139	1611390_a_at	CF516497	hypothetical protein LOC100254530	-	3e-17	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.06	1e-14	79	1614660_at	CF207466	-	-	4e-11	At1g52830	IAA6 (INDOLE-3-ACETIC ACID 6)	C.G.	S.X.	Please select
0.06	5e-14	77	1615985_at	CF516133	hypothetical protein LOC100264878	-	8e-17	At4g14560	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	C.G.	S.X.	Please select
0.04	8e-10	63	1616785_at	CF211839	hypothetical protein LOC100259648	-	1e-32	At4g14560	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	C.G.	S.X.	Please select
0.05	5e-8	57	1621754_at	CF213263	hypothetical protein LOC100253148	-	4e-9	At2g22670	IAA8	C.G.	S.X.	Please select
0.06	2e-7	56	1622508_at	CB341480	-	-	3e-7	At3g23030	IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	3e-55	216	Arabidopsis thaliana	At3g04730	819633	IAA16	early auxin-induced (IAA16)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.33	5e-61	236	Glycine max	GmaAffx.91936.1.S1_s_at	CF807661	-	-	4e-17	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.25	1e-19	97	Hordeum vulgare	Contig2503_at	Contig2503	-	-	9e-25	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.15	2e-17	91	Oryza sativa	Os12g0601300	AK068213.1	-	Auxin-responsive protein (Aux/IAA) (Fragment)	4e-18	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.32	1e-55	218	Populus trichocarpa	PtpAffx.201688.1.S1_at	pmrna3365	hypothetical protein	-	1e-23	At3g04730	IAA16	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	1e-17	91	Triticum aestivum	Ta.1890.1.S1_x_at	CA632713	-	-	5e-20	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select
0.10	6e-24	111	Zea mays	Zm.3607.1.A1_at	AW017627	IAA30 - auxin-responsive Aux/IAA family member	-	1e-14	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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