Gene omics information

Query gene ID 1613383_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5980.61613383_atCB922386--5e-68At5g45390CLPP4 (CLP PROTEASE P4)S.X.H.G.
0.6787.91618102_atCF415084--7e-37At2g18710SCY1 (SecY Homolog 1)S.X.H.G.
0.4464.11620794_atCF568783--3e-13At4g1500060S ribosomal protein L27 (RPL27C)S.X.H.G.
0.1616.71608570_atCD717861--1e-3At3g48590NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1)S.X.H.G.
0.1010.31611018_atCD003886--1e-78At3g59870unknown proteinS.X.H.G.
0.056.01608351_atCK138128.1--4e-10At4g29340PRF4 (PROFILIN 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.198.7GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2
5.898.6GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19
4.997.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
3.696.0GSM147672Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation1
3.094.2GSM147695Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation24
3.094.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.993.8GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
2.793.0GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22
2.692.5GSM147691Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation20
2.692.5GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00014001609611_atCF608067hypothetical protein LOC100254000-9e-39At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.054e-1341616095_atCF603382hypothetical protein LOC100265683-1e-45At1g66670CLPP3C.G.S.X.
0.022e+0321614806_s_atCB343751hypothetical protein LOC100264507-2e-4At2g25000WRKY60C.G.S.X.
0.026e+0301622860_atCA809326hypothetical protein LOC100256973-1e-81At2g28305unknown proteinC.G.S.X.
0.026e+0301622184_atCF405631hypothetical protein LOC100245643-4e-11At5g10650zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.016e+0301621944_atCA817687hypothetical protein LOC100255859-8e-118At2g21330fructose-bisphosphate aldolase, putativeC.G.S.X.
0.026e+0301619068_atCF215954hypothetical protein LOC100250461-1e-13At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.026e+0301617297_atCD801994hypothetical protein LOC100250858-2e-18At5g25510serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeC.G.S.X.
0.026e+0301617296_atCD798287hypothetical protein LOC100257141-6e-16At1g01160SSXT protein-related / transcription co-activator-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.525e-68258Arabidopsis thalianaAt5g45390834575CLPP4 (CLP PROTEASE P4)One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).---C.G.S.X.
0.581e-128460Glycine maxGmaAffx.85132.1.S1_atBE209869--2e-46At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.183e-1581Hordeum vulgareContig5120_atContig5120--6e-1At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.233e-1583Oryza sativaOs10g0580800AK104823.1-NClpP4 (Fragment)1e-5At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.434e-103375Populus trichocarpaPtpAffx.18452.1.A1_atCV233933hypothetical protein-4e-61At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.206e-961Triticum aestivumTa.7770.1.S1_a_atBJ321836--2e+0At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
0.141e-1479Zea maysZm.7056.5.S1_atAY108536.1hypothetical protein LOC100272517-3e-15At5g45390CLPP4 (CLP PROTEASE P4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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