Gene omics information

Query gene ID	1613370_at
Gene name	hypothetical protein LOC100246418
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1613370_at	CB346796	hypothetical protein LOC100246418	-	5e-4	At1g29680	unknown protein	S.X.	H.G.	Please select
0.80	93.6	1609355_at	BM436721	hypothetical protein LOC100255606	-	2e-6	At2g21490	LEA (DEHYDRIN LEA)	S.X.	H.G.	Please select
0.80	93.6	1621232_at	BQ793032	hypothetical protein LOC100249843	-	1e-7	At1g05510	-	S.X.	H.G.	Please select
0.73	90.8	1609832_at	CB916843	hypothetical protein LOC100267534	-	2e-8	At2g42000	plant EC metallothionein-like family 15 protein	S.X.	H.G.	Please select
0.73	90.8	1608715_at	CB977234	hypothetical protein LOC100258268	-	4e+0	At5g10280	ATMYB92 (MYB DOMAIN PROTEIN 92)	S.X.	H.G.	Please select
0.50	72.7	1619481_at	CB348820	hypothetical protein LOC100256947	-	2e-2	At4g25140	OLEO1 (OLEOSIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.0	99.9	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.3	99.7	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.1	99.7	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.7	99.7	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.0	99.6	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.7	99.6	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.4	99.6	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.8	99.5	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.4	99.4	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.2	99.4	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	36	1614654_at	CB009455	hypothetical protein LOC100246891	-	4e-94	At1g52980	GTP-binding family protein	C.G.	S.X.	Please select
0.03	6e-1	34	1617250_at	CF205713.1	-	-	7e+0	At5g63070	40S ribosomal protein S15, putative	C.G.	S.X.	Please select
0.01	2e+0	32	1619989_s_at	BQ792762	similar to ADP,ATP carrier protein, mitochondrial	-	1e-172	At3g08580	AAC1 (ADP/ATP CARRIER 1)	C.G.	S.X.	Please select
0.02	2e+0	32	1618281_at	CF517658	hypothetical protein LOC100250796	-	7e+0	At5g11080	ubiquitin family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1617580_at	CF518891	hypothetical protein LOC100250120	-	9e-14	At5g24120	SIGE (SIGMA FACTOR E)	C.G.	S.X.	Please select
0.02	2e+0	32	1615232_at	CF512532	-	-	8e-1	At1g61415	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1612675_at	CK136926.1	-	-	2e-82	At3g08580	AAC1 (ADP/ATP CARRIER 1)	C.G.	S.X.	Please select
0.01	2e+0	32	1607220_at	CF513372	hypothetical protein LOC100244846	-	4e-48	At5g01850	protein kinase, putative	C.G.	S.X.	Please select
0.01	9e+0	30	1622560_at	CF211302	hypothetical protein LOC100265315	-	3e-27	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	5e-4	46	Arabidopsis thaliana	At1g29680	839845	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	2e-7	57	Glycine max	Gma.2863.1.S1_at	CA802892	-	-	2e-9	At4g18920	unknown protein	C.G.	S.X.	Please select
0.10	1e-3	44	Hordeum vulgare	Contig6446_at	Contig6446	-	-	5e-1	At1g29680	unknown protein	C.G.	S.X.	Please select
0.12	1e-6	56	Oryza sativa	Os01g0728700	AK108000.1	-	Conserved hypothetical protein	3e-2	At1g29680	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	7e-1	36	Populus trichocarpa	PtpAffx.48368.1.S1_at	CK112095	hypothetical protein	-	2e+0	At1g46264	AT-HSFB4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	5e-7	56	Triticum aestivum	Ta.27704.1.S1_at	CD910590	-	-	2e+0	At1g29680	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zea mays	Zm.17771.1.S1_at	CF623570	-	-	5e+0	At5g27860	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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