Gene omics information

Query gene ID 1612959_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6384.31612959_atCB339907--2e-3At4g27300S-locus protein kinase, putativeS.X.H.G.
0.4464.11611689_atCB980747hypothetical protein LOC100258557-8e-39At3g05870APC11S.X.H.G.
0.3650.71612971_x_atBQ793379metallothionein-like protein-like-6e+0At4g16520ATG8F (autophagy 8f)S.X.H.G.
0.2734.01610539_x_atCF205566.1--5e+0At4g16520ATG8F (autophagy 8f)S.X.H.G.
0.1718.21610666_atCF518956hypothetical protein LOC100259734-2e-8At5g49890CLC-C (CHLORIDE CHANNEL C)S.X.H.G.
0.099.41611715_atCF210907hypothetical protein LOC100251903-9e-14At3g10940protein phosphatase-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.999.7GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.798.5GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
5.498.3GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.398.2GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.398.2GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.098.0GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.697.6GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.497.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.397.2GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.323e-823031607724_atCF510892--1e+0At4g01420CBL5 (CALCINEURIN B-LIKE PROTEIN 5)C.G.S.X.
0.031e-10651620502_atCF208333hypothetical protein LOC100256223-1e-14At1g56140leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.048e-6501615446_atCF210295hypothetical protein LOC100267115-3e-8At4g03230ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingC.G.S.X.
0.038e-3401620337_atCF213940similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel-2e-5At5g62500ATEB1B (END BINDING PROTEIN 1B)C.G.S.X.
0.023e-2381621143_atCA816025hypothetical protein LOC100243239-7e-3At5g22280unknown proteinC.G.S.X.
0.043e-2381620080_atCB345665hypothetical protein LOC100252174-5e-3At4g23230protein kinase family proteinC.G.S.X.
0.031e-1361618781_atCB922984hypothetical protein LOC100260972-1e+0At1g65032unknown proteinC.G.S.X.
0.011e-1361607291_atCB007647hypothetical protein LOC100265661-2e-134At5g52640ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)C.G.S.X.
0.025e-1341621580_atCB974796--3e-5At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-344Arabidopsis thalianaAt4g27300828838S-locus protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA---C.G.S.X.
0.071e-242Glycine maxGmaAffx.90253.1.S1_atCF805978--6e-3At4g38830protein kinase family proteinC.G.S.X.
0.095e-238Hordeum vulgareHV12L19u_atHV12L19u--3e-1At1g43730-C.G.S.X.
0.039e-756Oryza sativaOs06g0676600AK103523.1-Protein kinase domain containing protein4e-6At3g09010protein kinase family proteinC.G.S.X.
0.177e-1685Populus trichocarpaPtpAffx.225732.1.S1_atpmrna45301hypothetical protein-2e-6At4g21390B120C.G.S.X.
0.065e-446Triticum aestivumTaAffx.104776.1.S1_atCA745021--2e-4At5g56460protein kinase, putativeC.G.S.X.
0.022e-136Zea maysZm.15406.1.A1_atAI737751hypothetical protein LOC100191191-1e-4At2g25670unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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