Gene omics information

Query gene ID 1612920_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7491.01612920_atCF207623--1e+0At5g56060ATP binding / nucleotide binding / phenylalanine-tRNA ligaseS.X.H.G.
0.6081.91612793_atCB344029hypothetical protein LOC100261593-3e-5At3g54826-S.X.H.G.
0.5375.21614821_atCF216072hypothetical protein LOC100254178-2e-43At5g49940NFU2 (NIFU-LIKE PROTEIN 2)S.X.H.G.
0.5273.91612330_atCF372664hypothetical protein LOC100242653-2e-8At1g71750phosphoribosyltransferase family proteinS.X.H.G.
0.4868.81609135_atCF207623--1e+0At5g56060ATP binding / nucleotide binding / phenylalanine-tRNA ligaseS.X.H.G.
0.4767.71617466_atCB977275hypothetical protein LOC100265578-2e-6At1g08630THA1 (Threonine Aldolase 1)S.X.H.G.
0.4464.11616327_atCF211314hypothetical protein LOC100250497-1e+0At1g15330CBS domain-containing proteinS.X.H.G.
0.4464.11608970_s_atCF206450.1--7e-1At4g02810unknown proteinS.X.H.G.
0.4158.71615486_atCF415476hypothetical protein LOC100245706-7e-3At5g15410DND1 (DEFENSE NO DEATH 1)S.X.H.G.
0.4158.71608361_atCF517494hypothetical protein LOC100264929-3e-18At3g26580-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.099.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
15.799.9GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
13.599.8GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
10.999.7GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.199.5GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.299.4GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.099.3GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.899.0GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
6.698.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.298.8GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00013961609135_atCF207623--1e+0At5g56060ATP binding / nucleotide binding / phenylalanine-tRNA ligaseC.G.S.X.
0.033e-2381617722_atCA817078--1e+0At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeC.G.S.X.
0.024e-1341620695_atCF204841.1--3e-20At4g11260SGT1BC.G.S.X.
0.034e-1341620085_atCF516195hypothetical protein LOC100266649-1e+0At1g23240caleosin-related family proteinC.G.S.X.
0.024e-1341612840_a_atBQ794471hypothetical protein LOC100261580-2e+0At3g114704'-phosphopantetheinyl transferase family proteinC.G.S.X.
0.024e-1341611112_atCB971308hypothetical protein LOC100260186-9e-34At2g45790PMM (PHOSPHOMANNOMUTASE)C.G.S.X.
0.032e+0321622509_atCD801486--2e-11At1g49300RABG3E (RAB GTPASE HOMOLOG G3E)C.G.S.X.
0.022e+0321621949_atCB970083--2e+0At4g12100ubiquitin protein ligase bindingC.G.S.X.
0.012e+0321619145_s_atCB969125hypothetical protein LOC100250496-6e-36At2g27050EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt5g56060835704ATP binding / nucleotide binding / phenylalanine-tRNA ligaseF:phenylalanine-tRNA ligase activity, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:cytoplasm;PFMOB---C.G.S.X.
0.045e-136Glycine maxGma.8172.1.A1_atBU548935--4e+0At3g52940FK (FACKEL)C.G.S.X.
0.033e+032Hordeum vulgareContig13392_atContig13392--5e+0At4g32915-C.G.S.X.
0.033e+034Oryza sativaOs.4642.1.A1_s_at---0C.G.S.X.
0.073e-550Populus trichocarpaPtp.6933.1.S1_atDN495918hypothetical protein-4e+0At5g46980invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.031e-138Triticum aestivumTa.14384.1.A1_atBQ170804--3e+0At5g17470calmodulin-related protein, putativeC.G.S.X.
0.033e+032Zea maysZm.17538.1.S1_atCK370571hypothetical protein LOC100273692-1e+0At5g50710unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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