CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612905_s_at

Gene name hypothetical protein LOC100258381

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1612905_s_at CB345326 hypothetical protein LOC100258381 - 5e-3 At1g12830 unknown protein S.X. H.G.
0.73 90.8 1618133_at CF404967 hypothetical protein LOC100259114 - 2e-1 At5g28610 - S.X. H.G.
0.67 87.9 1608904_at CK138119.1 similar to F2D10.18 - 6e-9 At1g20696 HMGB3 (HIGH MOBILITY GROUP B 3) S.X. H.G.
0.44 64.1 1606938_at CD802354 hypothetical protein LOC100265256 - 4e-72 At1g52740 HTA9 (HISTONE H2A PROTEIN 9) S.X. H.G.
0.40 57.7 1609633_s_at CB971333 hypothetical protein LOC100254082 - 3e-1 At4g15735 SCRL10 (SCR-Like 10) S.X. H.G.
0.27 34.0 1615027_s_at CB977478 hypothetical protein LOC100246785 - 1e-15 At2g32080 PUR ALPHA-1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.1 96.9 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.1 94.6 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
3.0 94.2 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
2.9 93.8 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
2.9 93.8 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
2.9 93.8 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
2.9 93.8 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
2.8 93.4 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.6 92.5 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
2.6 92.5 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 8e-172 601 1608343_at CF201782.1 hypothetical protein LOC100258381 - 1e-4 At1g12830 unknown protein C.G. S.X.
0.03 6e-3 40 1606982_at CF609391 - - 2e-5 At3g20320 TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2) C.G. S.X.
0.02 9e-2 36 1616196_at CB970069 hypothetical protein LOC100257603 - 2e-59 At4g32150 ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) C.G. S.X.
0.03 9e-2 36 1607135_at CF515974 hypothetical protein LOC100245834 - 6e-2 At4g11080 high mobility group (HMG1/2) family protein C.G. S.X.
0.03 4e-1 34 1607903_at CF608166 hypothetical protein LOC100267377 - 1e+0 At1g67670 unknown protein C.G. S.X.
0.02 4e-1 34 1606446_at CF211473 - - 2e+0 At4g26210 mitochondrial ATP synthase g subunit family protein C.G. S.X.
0.03 1e+0 32 1619196_at CB916796 - - 1e-15 At1g12070 Rho GDP-dissociation inhibitor family protein C.G. S.X.
0.03 1e+0 32 1615377_at CB916796 hypothetical protein LOC100254819 - 1e-15 At1g12070 Rho GDP-dissociation inhibitor family protein C.G. S.X.
0.03 1e+0 32 1612454_at CF372709 - - 1e+0 At1g52200 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e-3 42 Arabidopsis thaliana At1g12830 837839 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA - - - C.G. S.X.
0.04 2e-3 44 Glycine max GmaAffx.77802.1.S1_at BI968400 - - 1e-3 At3g49940 LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38) C.G. S.X.
0.04 2e-4 46 Hordeum vulgare Contig6235_s_at Contig6235 - - 1e+0 At3g27850 RPL12-C (ribosomal protein l12-c) C.G. S.X.
0.04 4e-2 40 Oryza sativa Os11g0490300 9639.m02695 - Hypothetical protein 4e-3 At2g22080 unknown protein C.G. S.X.
0.09 1e-1 38 Populus trichocarpa PtpAffx.54521.1.S1_at DN489321 - - 7e-9 At1g12830 unknown protein C.G. S.X.
0.04 2e-2 40 Triticum aestivum TaAffx.110827.1.S1_at CA653572 - - 1e+0 At4g00585 unknown protein C.G. S.X.
0.04 9e-6 50 Zea mays Zm.1491.1.A1_at BE050951 hypothetical protein LOC100278490 - 7e-2 At4g17670 senescence-associated protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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