CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612900_at

Gene name hypothetical protein LOC100259949

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1612900_at CD797784 hypothetical protein LOC100259949 - 5e+0 At5g44585 unknown protein S.X. H.G.
0.60 81.9 1612421_at CF213299 hypothetical protein LOC100262002 - 4e+0 At5g13080 WRKY75 S.X. H.G.
0.43 61.5 1610863_at CD801616 cullin 1 - 2e-19 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) S.X. H.G.
0.35 48.5 1618609_s_at BQ800563 hypothetical protein LOC100249094 - 1e+0 At4g28556 RIC7 S.X. H.G.
0.23 27.5 1611871_at CF415063 dehydroascorbate reductase - 2e-9 At1g19570 DHAR1 (dehydroascorbate reductase) S.X. H.G.
0.16 16.7 1616425_at CF208709 hypothetical protein LOC100260616 - 5e-7 At2g32730 26S proteasome regulatory subunit, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.4 97.3 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.4 97.3 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
4.2 97.1 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
4.0 96.7 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.7 96.2 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.7 96.2 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.7 96.2 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.6 96.0 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
3.5 95.7 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
3.5 95.7 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.63 9e-110 395 1622663_at CD802428 - - 1e+0 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.01 4e-1 34 1621872_s_at CB005621 hypothetical protein LOC100265707 - 2e-7 At1g74840 myb family transcription factor C.G. S.X.
0.03 4e-1 34 1617380_at CF206574.1 - - 3e-1 Atcg00020 - C.G. S.X.
0.01 4e-1 34 1611216_at CB912018 hypothetical protein LOC100262087 - 4e-126 At1g16180 TMS membrane family protein / tumour differentially expressed (TDE) family protein C.G. S.X.
0.03 2e+0 32 1621813_at CA817946 - - 3e-1 At1g06620 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.02 2e+0 32 1615043_at CF207020.1 - - 2e-8 At5g43450 2-oxoglutarate-dependent dioxygenase, putative C.G. S.X.
0.02 6e+0 30 1621689_at CF212507 hypothetical protein LOC100263819 - 3e-70 At5g17770 ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1) C.G. S.X.
0.02 6e+0 30 1621153_at CB969140 hypothetical protein LOC100253912 - 8e+0 At5g61030 GR-RBP3 (glycine-rich RNA-binding protein 3) C.G. S.X.
0.02 6e+0 30 1621037_at CB980438 - - 5e+0 At5g18690 AGP25 (ARABINOGALACTAN PROTEINS 25) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e+0 32 Arabidopsis thaliana At5g44585 6241037 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 7e+0 32 Glycine max HgAffx.20946.1.S1_at BI749393 - - 3e+0 At1g21010 unknown protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare EBro03_SQ007_M15_at EBro03_SQ007_M15 - - 9e+0 At5g16920 - C.G. S.X.
0.02 3e+0 34 Oryza sativa Os04g0648400 9632.m05398 - Leucine-rich repeat, typical subtype containingprotein 1e+0 At5g41050 unknown protein C.G. S.X.
0.16 3e-14 79 Populus trichocarpa PtpAffx.203914.1.S1_at pmrna7727 nadph-cytochrome P450 oxydoreductase - 3e-16 At3g02280 flavodoxin family protein C.G. S.X.
0.03 1e+0 34 Triticum aestivum TaAffx.107485.1.S1_at CA699183 - - 1e-3 At1g24070 ATCSLA10 C.G. S.X.
0.03 1e-4 46 Zea mays Zm.4835.1.A1_at CA403328 hypothetical protein LOC100192885 - 6e-4 At3g02280 flavodoxin family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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