Gene omics information

Query gene ID 1612883_at
Gene name hypothetical protein LOC100241955
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81612883_atCF213322hypothetical protein LOC100241955-2e-95At5g20280ATSPS1F (sucrose phosphate synthase 1F)S.X.H.G.
0.8394.61606931_atCD797978hypothetical protein LOC100266572-3e-4At1g56230unknown proteinS.X.H.G.
0.6787.91608916_atCB007786hypothetical protein LOC100260173-2e-2At1g73390-S.X.H.G.
0.5375.21615374_atCB911656hypothetical protein LOC100241955-8e-1At1g34000OHP2 (ONE-HELIX PROTEIN 2)S.X.H.G.
0.4666.51612185_atCB008768hypothetical protein LOC100245556-3e-10At5g66460(1-4)-beta-mannan endohydrolase, putativeS.X.H.G.
0.3853.61616279_atBQ796307hypothetical protein LOC100260173-1e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.2100.0GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
17.899.9GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
17.299.9GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
16.499.9GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
15.599.9GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
14.199.8GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
12.299.8GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
12.199.8GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
9.799.6GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
8.399.4GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-3421617960_atCF510934hypothetical protein LOC100259803-1e-119At5g36230eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinC.G.S.X.
0.025e-1341622610_atCF413855hypothetical protein LOC100264665-5e-6At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.025e-1341620584_atCF212916hypothetical protein LOC100258622-3e-2At5g49070KCS21 (3-KETOACYL-COA SYNTHASE 21)C.G.S.X.
0.022e+0321622231_atAF467945.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeC.G.S.X.
0.022e+0321621824_atCD011778--4e-7At2g35800mitochondrial substrate carrier family proteinC.G.S.X.
0.022e+0321621379_atCF214294hypothetical protein LOC100267719-2e-4At1g26750unknown proteinC.G.S.X.
0.022e+0321620996_atCB342683hypothetical protein LOC100244314-4e-1At1g23040hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.022e+0321620454_s_atAF467946.1lipid transfer protein-2e+0At5g01870lipid transfer protein, putativeC.G.S.X.
0.032e+0321617032_s_atAF465408.1lipid transfer protein /// lipid transfer protein-9e-1At5g01870lipid transfer protein, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.292e-95349Arabidopsis thalianaAt5g20280832150ATSPS1F (sucrose phosphate synthase 1F)Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.---C.G.S.X.
0.394e-79295Glycine maxGma.2097.1.S1_atAW309489--2e-76At5g20280ATSPS1F (sucrose phosphate synthase 1F)C.G.S.X.
0.174e-1891Hordeum vulgareContig7277_atContig7277--3e-8At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)C.G.S.X.
0.202e-32141Oryza sativaOs08g0301500AK101676.1-Sucrose-phosphate synthase 2 (EC 2.4.1.14)(Fragment)2e-31At5g20280ATSPS1F (sucrose phosphate synthase 1F)C.G.S.X.
0.642e-179628Populus trichocarpaPtpAffx.141421.1.S1_atDN500621hypothetical protein-1e-158At5g20280ATSPS1F (sucrose phosphate synthase 1F)C.G.S.X.
0.118e-1271Triticum aestivumTa.4256.1.S1_atCD910522Sucrose-phosphate synthase 2-1e-13At5g20280ATSPS1F (sucrose phosphate synthase 1F)C.G.S.X.
0.132e-1375Zea maysZm.3748.1.S1_atCF624336--4e-23At5g11110ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage