CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612774_at

Gene name hypothetical protein LOC100261536

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1612774_at CF210198 hypothetical protein LOC100261536 - 2e+0 At5g40900 unknown protein S.X. H.G.
0.57 79.8 1610777_at CD797701 hypothetical protein LOC100263956 - 2e-42 At3g13670 protein kinase family protein S.X. H.G.
0.57 79.8 1614838_at CB977099 hypothetical protein LOC100244335 - 1e-4 At1g43640 AtTLP5 (TUBBY LIKE PROTEIN 5) S.X. H.G.
0.44 64.1 1619392_at CF513478 hypothetical protein LOC100259847 - 4e+0 At3g24060 self-incompatibility protein-related S.X. H.G.
0.36 50.7 1620897_at CF603365 similar to F-box-containing protein 2 - 3e-4 At1g06110 SKIP16 (SKP1/ASK-interacting protein 16) S.X. H.G.
0.23 27.5 AFFX-Vvi-actin-5_at - actin 1 - 0 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 97.7 GSM436409 V. riparia (VR, PI588259) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436392 V. riparia (VR, PI588259) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-3 40 1619712_at CB348192 hypothetical protein LOC100253333 - 7e-40 At2g22310 ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4) C.G. S.X.
0.02 5e-1 34 1622655_at CD717815 - - 5e+0 At5g58110 ATPase activator/ chaperone binding C.G. S.X.
0.02 5e-1 34 1618833_at CD717815 - - 5e+0 At5g58110 ATPase activator/ chaperone binding C.G. S.X.
0.02 2e+0 32 1620505_at Z54234.1 chitinase class I - 2e-3 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) C.G. S.X.
0.01 2e+0 32 1620457_at BQ795397 hypothetical protein LOC100261809 - 3e-33 At3g54470 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) C.G. S.X.
0.02 2e+0 32 1619499_at CF208527 hypothetical protein LOC100243214 - 1e-4 At5g58220 TTL (Transthyretin-Like protein) C.G. S.X.
0.02 2e+0 32 1617430_s_at Z54234.1 chitinase class I - 2e-3 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) C.G. S.X.
0.02 2e+0 32 1609188_at CD715995 hypothetical protein LOC100267424 - 2e-11 At5g54490 PBP1 (PINOID-BINDING PROTEIN 1) C.G. S.X.
0.01 2e+0 32 1607880_at BQ793902 hypothetical protein LOC100263570 - 4e-2 At2g02800 APK2B (PROTEIN KINASE 2B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g40900 834091 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO - - - C.G. S.X.
0.03 4e-2 40 Glycine max GmaAffx.23298.1.S1_at BI968289 - - 1e+0 At4g08406 unknown protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare Contig26319_at Contig26319 - - 2e+0 At1g69680 - C.G. S.X.
0.07 1e-6 56 Oryza sativa Os.34467.1.S1_at - - - 0 C.G. S.X.
0.40 4e-82 305 Populus trichocarpa PtpAffx.156629.1.S1_at CN517647 hypothetical protein - 6e+0 At3g06790 plastid developmental protein DAG, putative C.G. S.X.
0.02 5e-1 36 Triticum aestivum Ta.28569.1.A1_at BQ166427 - - 5e+0 At3g12012 CPuORF20 (Conserved peptide upstream open reading frame 20) C.G. S.X.
0.02 8e-1 34 Zea mays Zm.17803.1.S1_at CK371473 - - 1e+0 At5g62610 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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