CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612757_at

Gene name hypothetical protein LOC100241266

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1612757_at CD801743 hypothetical protein LOC100241266 - 1e+0 At2g32560 F-box family protein S.X. H.G.
0.50 72.7 1607756_s_at CF519234 hypothetical protein LOC100241574 - 3e-40 At3g08510 ATPLC2 (PHOSPHOLIPASE C 2) S.X. H.G.
0.29 37.7 1621139_at CB982951 hypothetical protein LOC100262947 - 3e-9 At5g08390 - S.X. H.G.
0.29 37.7 1614242_at CF211976 hypothetical protein LOC100243579 - 1e-1 At5g60800 heavy-metal-associated domain-containing protein S.X. H.G.
0.15 15.6 1621252_at CB978314 hypothetical protein LOC100263936 - 2e-8 At3g08620 KH domain-containing protein S.X. H.G.
0.12 12.1 1618602_at CD712496 hypothetical protein LOC100267246 - 4e-7 At1g79650 RAD23 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.7 93.0 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 34 1611216_at CB912018 hypothetical protein LOC100262087 - 4e-126 At1g16180 TMS membrane family protein / tumour differentially expressed (TDE) family protein C.G. S.X.
0.02 2e+0 32 1616824_at CB341656 hypothetical protein LOC100255130 - 4e-5 At3g16760 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.02 2e+0 32 1613217_at CD715499 - - 2e-5 At1g62620 flavin-containing monooxygenase family protein / FMO family protein C.G. S.X.
0.02 2e+0 32 1611179_at CB919891 - - 6e-3 At5g56760 ATSERAT1 C.G. S.X.
0.02 2e+0 32 1609430_at CD715499 - - 2e-5 At1g62620 flavin-containing monooxygenase family protein / FMO family protein C.G. S.X.
0.02 2e+0 32 1607746_at CF208545 hypothetical protein LOC100266024 - 5e-19 At1g75500 nodulin MtN21 family protein C.G. S.X.
0.02 2e+0 32 1607366_at CB919891 hypothetical protein LOC100264650 - 6e-3 At5g56760 ATSERAT1 C.G. S.X.
0.03 2e+0 32 1606743_at CF210771 hypothetical protein LOC100250210 - 4e-1 At5g23260 TT16 (TRANSPARENT TESTA16) C.G. S.X.
0.02 6e+0 30 1621658_at CD720716 - - 1e+0 At5g51090 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At2g32560 817817 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO - - - C.G. S.X.
0.03 5e-1 36 Glycine max GmaAffx.60498.2.S1_at BQ298007 - - 1e-5 At5g67130 phospholipase C/ phosphoric diester hydrolase C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HS02H08u_at HS02H08u - - 6e+0 At4g18282 unknown protein C.G. S.X.
0.04 3e-3 44 Oryza sativa Os.17133.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.86455.1.S1_at AJ853472.1 sodium proton exchanger - 6e-9 At5g55470 ATNHX3 C.G. S.X.
0.03 9e-2 38 Triticum aestivum TaAffx.43313.1.S1_at BQ801654 - - 1e+0 At5g05230 ubiquitin-protein ligase C.G. S.X.
0.03 2e+0 32 Zea mays Zm.18305.1.A1_at CO533683 Isocitrate lyase - 1e-9 At3g21720 ICL (ISOCITRATE LYASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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