Gene omics information

Query gene ID	1612717_s_at
Gene name	hypothetical protein LOC100259033
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.86	95.1	1612717_s_at	CA814430	hypothetical protein LOC100259033	-	1e+0	At1g01225	NC domain-containing protein-related	S.X.	H.G.	Please select
0.61	83.2	1621992_s_at	BQ793824	hypothetical protein LOC100259183	-	2e-11	At5g66290	unknown protein	S.X.	H.G.	Please select
0.53	75.2	1617552_at	CF202269.1	hypothetical protein LOC100243817	-	4e-35	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	S.X.	H.G.	Please select
0.53	75.2	1607612_at	CF202447.1	hypothetical protein LOC100262044	-	2e-12	At4g31300	PBA1	S.X.	H.G.	Please select
0.31	41.3	1615918_at	CD797632	hypothetical protein LOC100247805	-	3e+0	At5g19050	unknown protein	S.X.	H.G.	Please select
0.21	24.0	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	S.X.	H.G.	Please select
0.15	15.6	1615091_at	CD801426	hypothetical protein LOC100242289	-	2e-2	At1g13770	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	98.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
5.1	98.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.6	97.6	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
4.3	97.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
4.3	97.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
4.3	97.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
4.2	97.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
4.1	96.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
3.9	96.6	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.8	96.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.80	1e-179	626	1614109_at	CF204230.1	hypothetical protein LOC100259033	-	1e+0	At1g48510	cytochrome c oxidase assembly protein surfeit-related	C.G.	S.X.	Please select
0.03	4e-1	34	1617871_at	CF405710	-	-	1e+0	At3g07440	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	34	1611205_at	CF203034.1	-	-	1e-65	At5g56010	HSP81-3	C.G.	S.X.	Please select
0.03	2e+0	32	1622544_a_at	CD801877	hypothetical protein LOC100259887	-	9e-12	At5g57630	CIPK21 (CBL-interacting protein kinase 21)	C.G.	S.X.	Please select
0.03	2e+0	32	1611422_at	CB002682	-	-	1e+0	At3g27250	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1608579_at	CF515265	hypothetical protein LOC100245274	-	2e+0	At5g60290	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1607228_at	CF515176	hypothetical protein LOC100245274	-	1e-1	At3g21560	UGT84A2	C.G.	S.X.	Please select
0.03	2e+0	32	1606478_at	CB346797	-	-	1e+0	At5g06660	unknown protein	C.G.	S.X.	Please select
0.01	6e+0	30	1622468_at	CF512400	-	-	4e-51	Atcg01120	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At1g01225	839358	NC domain-containing protein-related	F:unknown;P:unknown;C:cellular_component unknown;PBMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.59792.1.S1_at	BI973638	-	-	8e-1	At4g04190	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	32	Hordeum vulgare	HVSMEm0018L03r2_at	HVSMEm0018L03r2	-	-	3e+0	At4g22214	-	C.G.	S.X.	Please select
0.02	3e+0	34	Oryza sativa	OsAffx.15024.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	2e-9	63	Populus trichocarpa	PtpAffx.64654.1.S1_a_at	CV241377	-	-	1e-28	At1g49170	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	6e-3	42	Triticum aestivum	Ta.14050.1.S1_at	BQ805802	-	-	2e+0	At3g47610	transcription regulator/ zinc ion binding	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.1032.1.A1_at	AI881679	-	-	3e+0	At2g40650	pre-mRNA splicing factor PRP38 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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