Gene omics information

Query gene ID 1612670_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81612670_atCB343506--3e-4At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeS.X.H.G.
0.3141.31618712_atCB003306--3e-1At4g21330DYT1 (DYSFUNCTIONAL TAPETUM 1)S.X.H.G.
0.1010.31620379_atCB980269--4e+0At4g25100FSD1 (FE SUPEROXIDE DISMUTASE 1)S.X.H.G.
0.088.51619674_atCD715040--3e-1At5g40500unknown proteinS.X.H.G.
0.023.21622343_atBQ794086--8e+0At3g47650bundle-sheath defective protein 2 family / bsd2 familyS.X.H.G.
0.000.51607928_atCF201793.1--5e-3At4g08230glycine-rich proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.999.8GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
11.299.7GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
8.799.5GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
5.898.6GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61
5.198.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
4.897.8GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13
4.597.5GSM436400V. riparia (VR, PI588259) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.196.9GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.796.2GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.753e-1404961609923_atCB341249hypothetical protein LOC100244701-2e-27At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.053e-7541622249_atCA817903glycolate oxidase-like-6e-153At3g14420(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.051e-3421609301_atCD800682hypothetical protein LOC100253231-4e+0At3g14150(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.033e-1341620298_atCF513792hypothetical protein LOC100253937-1e-18At1g47270AtTLP6 (TUBBY LIKE PROTEIN 6)C.G.S.X.
0.031e+0321622676_s_atCF212246hypothetical protein LOC100247010-3e-16At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)C.G.S.X.
0.021e+0321619574_atCB343067hypothetical protein LOC100265787-4e-18At4g35050MSI3 (MULTICOPY SUPPRESSOR OF IRA1 3)C.G.S.X.
0.021e+0321617811_s_atBQ794232hypothetical protein LOC100254399-4e-14At2g21870unknown proteinC.G.S.X.
0.031e+0321613028_atCB344296--4e+0At1g49260-C.G.S.X.
0.031e+0321613200_atCF203042.1--9e-14At2g21870unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-446Arabidopsis thalianaAt3g14415820664(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeF:glycolate oxidase activity, electron carrier activity, oxidoreductase activity, FMN binding, catalytic activity;P:metabolic process;C:in 6 components;OBFMPA---C.G.S.X.
0.134e-756Glycine maxGma.7309.1.S1_atCD396548peroxisomal glycolate oxidase-1e-113At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.035e-134Hordeum vulgareContig9338_atContig9338--2e-11At5g65110ACX2 (ACYL-COA OXIDASE 2)C.G.S.X.
0.048e+032Oryza sativaOsAffx.32348.1.A1_x_at---0C.G.S.X.
0.109e-238Populus trichocarpaPtp.846.1.A1_atCV281299hypothetical protein-3e-86At3g14415(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeC.G.S.X.
0.041e+034Triticum aestivumTaAffx.113360.1.S1_atCA614361--3e-1At1g34780ATAPRL4 (APR-like 4)C.G.S.X.
0.024e-134Zea maysZm.531.1.S1_atU87949.1proliferating cell nuclear antigen2-9e-37At1g07370PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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