Gene omics information

Query gene ID 1612617_s_at
Gene name hypothetical protein LOC100257516
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4666.51612617_s_atCB343433hypothetical protein LOC100257516-1e+0At1g08985DNA bindingS.X.H.G.
0.5072.71620502_atCF208333hypothetical protein LOC100256223-1e-14At1g56140leucine-rich repeat family protein / protein kinase family proteinS.X.H.G.
0.5072.71620043_atAY427149.1hypothetical protein LOC100248492-1e-3At2g31880leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.2530.51618942_atCA817511--2e-6At3g54700carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporterS.X.H.G.
0.2327.51608624_atCF207346hypothetical protein LOC100250126-1e+0At3g28170unknown proteinS.X.H.G.
0.1718.21610909_atCF205434.1--4e+0At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.298.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.997.9GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48
4.797.7GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.697.6GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53
4.497.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
4.297.1GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.196.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
3.896.4GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68
3.696.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
3.696.0GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7507791619582_atCF203396.1hypothetical protein LOC100257516-1e+0At5g11330monooxygenase family proteinC.G.S.X.
0.252e-14771617437_atCF517117--4e+0At5g65780ATBCAT-5C.G.S.X.
0.037e-2361614506_atCD801364hypothetical protein LOC100241962-1e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
0.023e-1341619596_atCB973318hypothetical protein LOC100255105-6e-1At1g65113SCRL2 (SCR-Like 2)C.G.S.X.
0.033e-1341618848_atCB977336hypothetical protein LOC100261550-6e-10At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.033e-1341616160_a_atCB977336hypothetical protein LOC100261550-6e-10At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.023e-1341610050_atCD801212hypothetical protein LOC100266345-2e-13At2g20050ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphataseC.G.S.X.
0.031e+0321621078_atBQ798476hypothetical protein LOC100243540-4e+0Atmg00570-C.G.S.X.
0.021e+0321619458_atCA817767hypothetical protein LOC100241604-2e-3At1g18760zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt1g08985837419DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P---C.G.S.X.
0.053e-136Glycine maxGmaAffx.37597.1.S1_atBQ453028--5e-5At1g05940CAT9 (CATIONIC AMINO ACID TRANSPORTER 9)C.G.S.X.
0.042e+032Hordeum vulgareHVSMEl0006J08r2_s_atHVSMEl0006J08r2--3e+0At5g38220hydrolaseC.G.S.X.
0.035e-136Oryza sativaOsAffx.15983.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.211012.1.S1_atpmrna21638hypothetical protein-2e+0At3g05800transcription factorC.G.S.X.
0.034e+032Triticum aestivumTa.22169.1.S1_atCA728026--1e-1At2g32010endonuclease/exonuclease/phosphatase family proteinC.G.S.X.
0.044e-134Zea maysZmAffx.69.1.A1_atAI665154--8e-1Atcg01070-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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