Gene omics information

Query gene ID 1612597_at
Gene name hypothetical protein LOC100245968
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6988.31612597_atCD797662hypothetical protein LOC100245968-3e-5At4g22745MBD1S.X.H.G.
0.5273.91622402_atCD799344hypothetical protein LOC100241730-4e+0At3g15260protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.5072.71617461_atCF609620hypothetical protein LOC100245670-1e-1At5g25360unknown proteinS.X.H.G.
0.4260.11615682_s_atCA809122hypothetical protein LOC100247119-2e-15At4g38740ROC1 (ROTAMASE CYP 1)S.X.H.G.
0.4260.11620284_atCA817004hypothetical protein LOC100249470-1e-17At4g35220cyclase family proteinS.X.H.G.
0.3243.11619039_atCF405804hypothetical protein LOC100261285-2e-3At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)S.X.H.G.
0.3243.11617485_atCF209626--2e-8At5g66080protein phosphatase 2C family protein / PP2C family proteinS.X.H.G.
0.2327.51607758_atBQ796718hypothetical protein LOC100267502-3e-20At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)S.X.H.G.
0.2124.01617058_s_atCA813874hypothetical protein LOC100246864-4e+0At5g04130DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putativeS.X.H.G.
0.2124.01615315_atCB921193hypothetical protein LOC100251685-5e-54At4g21450vesicle-associated membrane family protein / VAMP family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.698.4GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.297.1GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.395.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.294.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.094.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.793.0GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.692.5GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-1341615290_atCD798746--5e-12At1g08450CRT3 (CALRETICULIN 3)C.G.S.X.
0.025e-1341612764_atCD718151--1e-13At4g27600pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.025e-1341609839_atCF202460.1hypothetical protein LOC100259598-4e-1At1g69760unknown proteinC.G.S.X.
0.025e-1341608986_atCD718151--1e-13At4g27600pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.012e+0321622113_atCF209612hypothetical protein LOC100245719-4e-61At5g15050glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinC.G.S.X.
0.022e+0321619661_atCB001672--1e+0At4g09030AGP10 (ARABINOGALACTAN PROTEIN 10)C.G.S.X.
0.022e+0321619573_atCD721204hypothetical protein LOC100250659-2e-3At1g27730STZ (salt tolerance zinc finger)C.G.S.X.
0.032e+0321616549_atCF511455--4e+0At5g47060senescence-associated protein-relatedC.G.S.X.
0.022e+0321615902_atCB001672--1e+0At4g09030AGP10 (ARABINOGALACTAN PROTEIN 10)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-550Arabidopsis thalianaAt4g22745828371MBD1Protein containing methyl-CpG-binding domain.---C.G.S.X.
0.106e-1065Glycine maxGmaAffx.18798.1.S1_atBE819840--1e-7At3g63030MBD4C.G.S.X.
0.023e+032Hordeum vulgareContig403_atContig403--5e-22At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)C.G.S.X.
0.035e-240Oryza sativaOs02g0290300AK068360.1-Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein4e-10At1g04140transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.146e-1065Populus trichocarpaPtpAffx.37445.1.A1_atCV252110methyl binding domain protein-5e-1At3g63030MBD4C.G.S.X.
0.032e+034Triticum aestivumTa.15672.1.S1_atCA486250--3e+0At1g18835MIF3 (MINI ZINC FINGER)C.G.S.X.
0.021e+130Zea maysZm.9155.1.A1_atBM266962--1e+0At5g03520ATRAB8CC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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