Gene omics information

Query gene ID	1612437_a_at
Gene name	hypothetical protein LOC100267860
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	90.8	1612437_a_at	CF405889	hypothetical protein LOC100267860	-	1e-3	At1g80950	phospholipid/glycerol acyltransferase family protein	S.X.	H.G.	Please select
0.62	83.3	1620526_at	BQ799509	hypothetical protein LOC100261578	-	1e-104	At1g54340	ICDH (ISOCITRATE DEHYDROGENASE)	S.X.	H.G.	Please select
0.53	75.2	1614557_s_at	CF405834	hypothetical protein LOC100243157	-	3e-62	At2g03120	ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)	S.X.	H.G.	Please select
0.50	72.7	1613126_at	CF214395	hypothetical protein LOC100232876	-	5e-35	At5g41950	binding	S.X.	H.G.	Please select
0.45	64.6	1614321_at	BQ796017	-	-	1e+0	At3g03220	ATEXPA13 (ARABIDOPSIS THALIANA EXPANSIN A13)	S.X.	H.G.	Please select
0.42	60.1	1610625_at	CD802063	hypothetical protein LOC100259247	-	6e-30	At4g08960	phosphotyrosyl phosphatase activator (PTPA) family protein	S.X.	H.G.	Please select
0.36	50.7	1618154_at	CF607911	hypothetical protein LOC100258219	-	3e-44	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	S.X.	H.G.	Please select
0.34	46.8	1622114_at	CD798978	hypothetical protein LOC100265981	-	6e-27	At2g45200	GOS12 (GOLGI SNARE 12)	S.X.	H.G.	Please select
0.33	45.7	1620640_s_at	CA809468	hypothetical protein LOC100267834	-	9e-9	At4g24590	unknown protein	S.X.	H.G.	Please select
0.30	39.4	1621953_s_at	CB982946	hypothetical protein LOC100252245	-	3e-33	At1g27970	NTF2B (NUCLEAR TRANSPORT FACTOR 2B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.6	96.0	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.6	92.5	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.4	91.3	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM436412	V. riparia (VR, PI588259) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-1	34	1619798_at	CF206345.1	-	-	6e+0	At5g50740	metal ion binding	C.G.	S.X.	Please select
0.02	4e-1	34	1616745_at	CA817885	hypothetical protein LOC100261576	-	2e+0	At3g04590	DNA-binding family protein	C.G.	S.X.	Please select
0.03	4e-1	34	1614713_at	CA816000	-	-	1e+0	At5g24980	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1621684_at	CB345622	-	-	6e-98	Atcg00650	-	C.G.	S.X.	Please select
0.00	1e+0	32	1620265_at	BQ793093	-	-	0	Atcg00480	-	C.G.	S.X.	Please select
0.02	1e+0	32	1620231_s_at	CB981280	hypothetical protein LOC100264312	-	2e-39	At4g35840	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1619277_at	CD800694	hypothetical protein LOC100267656	-	8e+0	At5g05550	transcription factor	C.G.	S.X.	Please select
0.03	1e+0	32	1616948_at	CB972594	similar to putative tryptophanyl-tRNA synthetase	-	6e-12	At2g25840	OVA4 (ovule abortion 4)	C.G.	S.X.	Please select
0.00	1e+0	32	1610039_s_at	CA817529	similar to NADH-plastoquinone oxidoreductase subunit K	-	0	Atcg00480	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-3	44	Arabidopsis thaliana	At1g80950	844435	phospholipid/glycerol acyltransferase family protein	F:acyltransferase activity;P:metabolic process;C:endoplasmic reticulum, nucleus;BOMPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.30	2e-77	289	Glycine max	Gma.3921.2.S1_x_at	BG790883	-	-	1e-27	At1g80950	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please select
0.12	4e-8	57	Hordeum vulgare	Contig10474_at	Contig10474	-	-	2e-16	At1g80950	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please select
0.10	4e-14	79	Oryza sativa	Os05g0357800	AK060514.1	-	Phospholipid/glycerol acyltransferase familyprotein	2e-4	At1g80950	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.41	1e-56	220	Populus trichocarpa	PtpAffx.80921.2.A1_a_at	CK096516	hypothetical protein	-	2e-39	At1g80950	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	4e-13	75	Triticum aestivum	Ta.19849.1.S1_at	CD373669	-	-	2e-10	At1g80950	phospholipid/glycerol acyltransferase family protein	C.G.	S.X.	Please select
0.04	2e+0	32	Zea mays	ZmAffx.776.1.A1_at	AI746212	-	-	2e-1	At4g28630	ATM1 (ABC TRANSPORTER OF THE MITOCHONDRION)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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