CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612432_at

Gene name hypothetical protein LOC100261638

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1612432_at CA818379 hypothetical protein LOC100261638 - 5e+0 At1g17200 integral membrane family protein S.X. H.G.
0.60 81.9 1620683_at CA811381 hypothetical protein LOC100245630 - 8e-9 At4g26160 ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1) S.X. H.G.
0.50 72.7 1608259_at CF205412.1 hypothetical protein LOC100255358 - 2e-6 At5g59520 ZIP2 S.X. H.G.
0.50 72.7 1619820_s_at CA811381 hypothetical protein LOC100245630 - 8e-9 At4g26160 ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1) S.X. H.G.
0.47 67.7 1622760_at CD719223 hypothetical protein LOC100266427 - 1e+0 At3g61920 unknown protein S.X. H.G.
0.34 46.8 1619513_at CA817243 hypothetical protein LOC100247939 - 4e-7 At2g33600 cinnamoyl-CoA reductase family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.0 99.5 GSM299457 C_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.5 99.2 GSM322362 genotype: Chardonnay - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
6.4 98.9 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
6.3 98.8 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
6.3 98.8 GSM299456 C_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.2 98.8 GSM299460 D_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.8 98.6 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
5.4 98.3 GSM147682 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 11
5.3 98.2 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
5.1 98.1 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 1e-65 248 1618276_at CB349729 - - 2e-2 At2g37600 60S ribosomal protein L36 (RPL36A) C.G. S.X.
0.05 2e-5 48 1610600_at CA813949 hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829 - 3e-1 At3g08580 AAC1 (ADP/ATP CARRIER 1) C.G. S.X.
0.03 9e-2 36 1610456_at CF415335 - - 1e-37 At1g65290 mtACP2 (mitochondrial acyl carrier protein 2) C.G. S.X.
0.03 1e+0 32 1608330_at CB978338 hypothetical protein LOC100259395 - 5e+0 At5g22210 unknown protein C.G. S.X.
0.02 5e+0 30 1618237_at CF209673 - - 2e+0 At1g22885 unknown protein C.G. S.X.
0.02 5e+0 30 1617449_at CD010357 - - 0 Atmg00570 - C.G. S.X.
0.02 5e+0 30 1613633_at CD010357 - - 0 Atmg00570 - C.G. S.X.
0.03 5e+0 30 1612292_at CF201786.1 - - 1e+0 At5g09940 unknown protein C.G. S.X.
0.03 5e+0 30 1612031_at CF413741 nhx1 antiporter - 4e-1 At4g12060 Clp amino terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At1g17200 838291 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.03 3e+1 30 Glycine max PsAffx.psML001xM15f_at PsAffx.psML001xM15f - - 2e+0 At2g24090 ribosomal protein L35 family protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HD10K20r_at HD10K20r - - 1e+1 At5g15320 unknown protein C.G. S.X.
0.02 9e+0 32 Oryza sativa Os01g0771100 AK106478.1 - Mitochondrial glycoprotein family protein 4e-2 At5g23100 unknown protein C.G. S.X.
0.10 2e-6 54 Populus trichocarpa PtpAffx.215144.1.S1_at pmrna29173 hypothetical protein - 3e+0 At5g63440 unknown protein C.G. S.X.
0.03 5e+0 32 Triticum aestivum Ta.9613.2.S1_at CA610577 - - 1e+0 At4g11250 AGL52 C.G. S.X.
0.03 8e+0 30 Zea mays Zm.9745.1.A1_at BM341408 - - 2e+1 At5g24570 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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