CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612420_at

Gene name hypothetical protein LOC100252211

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1612420_at CD717999 hypothetical protein LOC100252211 - 2e+0 At1g19086 unknown protein S.X. H.G.
0.44 64.1 1616298_at CF213113 - - 1e-18 At3g56900 aladin-related / adracalin-related S.X. H.G.
0.42 60.1 1617002_at CB971115 - - 1e+0 At1g06500 unknown protein S.X. H.G.
0.35 48.5 1610167_at CF403642 hypothetical protein LOC100254398 - 4e-12 At5g14220 HEMG2 S.X. H.G.
0.35 48.5 1620612_s_at CF208882 similar to ADP-ribosylation factor - 4e-128 At2g47170 ARF1A1C S.X. H.G.
0.33 45.7 1608170_at CD798362 hypothetical protein LOC100248761 - 2e-24 At1g04850 ubiquitin-associated (UBA)/TS-N domain-containing protein S.X. H.G.
0.31 41.3 1619095_s_at CB341757 hypothetical protein LOC100257742 - 8e-8 At5g63280 zinc finger (C2H2 type) family protein S.X. H.G.
0.30 39.4 1613703_at BQ800381 hypothetical protein LOC100241006 - 5e-13 At3g55520 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative S.X. H.G.
0.29 37.7 1615765_x_at CF202835.1 - - 7e-4 At1g55680 WD-40 repeat family protein S.X. H.G.
0.24 28.7 1615020_at CF215189 hypothetical protein LOC100255532 - 1e+0 At3g11250 60S acidic ribosomal protein P0 (RPP0C) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.6 96.0 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
3.4 95.5 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.4 95.5 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
3.3 95.2 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.2 94.9 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.2 94.9 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
3.0 94.2 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
2.9 93.8 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
2.7 93.0 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.7 93.0 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 1560 1616228_at CD717999 - - 2e+0 At1g19086 unknown protein C.G. S.X.
0.02 6e-1 34 1620089_at CF512740 hypothetical protein LOC100264325 - 2e-15 At1g57720 elongation factor 1B-gamma, putative / eEF-1B gamma, putative C.G. S.X.
0.02 6e-1 34 1619806_at CB340138 - - 8e-1 At3g60670 zinc-binding protein, putative C.G. S.X.
0.02 6e-1 34 1611055_at CB975661 hypothetical protein LOC100260295 - 1e-1 At1g80920 J8 C.G. S.X.
0.02 2e+0 32 1619096_at CB969616 hypothetical protein LOC100262646 - 1e-7 At4g24270 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.02 2e+0 32 1612285_at CF204274.1 - - 3e-8 At5g24530 DMR6 (DOWNY MILDEW RESISTANT 6) C.G. S.X.
0.02 2e+0 32 1609503_at CF404599 hypothetical protein LOC100267009 - 3e-1 At5g11970 unknown protein C.G. S.X.
0.02 2e+0 32 1608694_at CF517483 similar to E3 ubiquitin-protein ligase UPL1 - 5e-47 At1g55860 UPL1 (UBIQUITIN-PROTEIN LIGASE 1) C.G. S.X.
0.02 9e+0 30 1622870_at CB348576 hypothetical protein LOC100245835 - 3e-13 At4g25750 ABC transporter family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g19086 6240344 unknown protein F:unknown;P:unknown;C:endomembrane system;P - - - C.G. S.X.
0.13 2e-10 67 Glycine max GmaAffx.53557.1.S1_at BE474549 - - 2e-2 At5g52830 WRKY27 C.G. S.X.
0.02 2e-1 36 Hordeum vulgare EBro08_SQ004_P13_at EBro08_SQ004_P13 - - 5e+0 At5g34828 - C.G. S.X.
0.02 4e+0 34 Oryza sativa Os01g0651600 NM_192378.1 - - 3e-1 At5g18920 unknown protein C.G. S.X.
0.10 7e-4 46 Populus trichocarpa PtpAffx.138886.1.A1_at BP933487 hypothetical protein - 5e+0 At5g23395 - C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.85734.1.S1_at CA620117 - - 1e+1 At5g35630 GS2 (GLUTAMINE SYNTHETASE 2) C.G. S.X.
0.03 5e-2 38 Zea mays Zm.7178.1.S1_at BI396376 - - 4e+0 At2g29180 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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