Gene omics information

Query gene ID	1612360_at
Gene name	hypothetical protein LOC100244110
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.64	84.7	1612360_at	CB970071	hypothetical protein LOC100244110	-	2e-152	At3g28710	H+-transporting two-sector ATPase, putative	S.X.	H.G.	Please select
0.82	93.9	1606368_s_at	CF208516	actin 1	-	0	At5g09810	ACT7 (ACTIN 7)	S.X.	H.G.	Please select
0.82	93.9	AFFX-Vvi-actin-3_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.80	93.6	AFFX-Vvi-actin-3_c4_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.78	92.6	AFFX-Vvi-actin-3_c6_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.75	91.3	1609191_s_at	CB978023	hypothetical protein LOC100258056	-	0	At5g26751	ATSK11	S.X.	H.G.	Please select
0.74	91.0	AFFX-Vvi-actin-3_c2_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.71	89.5	AFFX-Vvi-actin-3_c7_s_at	-	actin 1	-	0			S.X.	H.G.	Please select
0.59	80.6	1618690_at	CF207597	hypothetical protein LOC100259195	-	3e-16	At1g20110	zinc finger (FYVE type) family protein	S.X.	H.G.	Please select
0.53	75.2	1611412_at	CF517248	hypothetical protein LOC100244694	-	2e+0	At5g37480	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.2	89.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.0	88.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
1.8	86.0	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
1.8	86.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
1.7	84.7	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
1.7	84.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-2	40	1611073_at	CD007571	-	-	2e-2	At4g18975	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.02	1e-2	40	1607230_at	CD007571	-	-	2e-2	At4g18975	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.02	2e-1	36	1609856_at	CD802436	hypothetical protein LOC100262009	-	4e+0	At4g32690	GLB3	C.G.	S.X.	Please select
0.01	8e-1	34	1614043_at	CB348418	hypothetical protein LOC100243305	-	4e-57	At5g13520	peptidase M1 family protein	C.G.	S.X.	Please select
0.01	8e-1	34	1610384_s_at	CB340178	hypothetical protein LOC100252560	-	3e-5	At1g23140	C2 domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	1622288_at	CB974798	hypothetical protein LOC100241457	-	1e+0	At2g20870	cell wall protein precursor, putative	C.G.	S.X.	Please select
0.02	3e+0	32	1622414_at	BQ796276	hypothetical protein LOC100263992	-	2e-2	At3g19000	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please select
0.02	3e+0	32	1622248_at	CF519150	hypothetical protein LOC100256857	-	1e+0	At4g08395	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	1622050_at	CF372928	hypothetical protein LOC100261101	-	5e-1	At3g16360	AHP4 (HPT PHOSPHOTRANSMITTER 4)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.67	2e-152	539	Arabidopsis thaliana	At3g28710	822502	H+-transporting two-sector ATPase, putative	F:hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:vacuolar membrane, plasma membrane, vacuole, plant-type vacuole;MFOPAB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.61	0	904	Glycine max	Gma.11223.1.S1_at	BG839304	-	-	4e-169	At3g28710	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please select
0.48	2e-110	398	Hordeum vulgare	Contig2986_at	Contig2986	-	-	1e-39	At3g28710	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please select
0.54	7e-123	442	Oryza sativa	Os01g0587000	AK067605.1	-	Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)	2e-75	At3g28710	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.57	0	724	Populus trichocarpa	PtpAffx.13438.1.S1_s_at	AI167052	hypothetical protein	-	2e-96	At3g28715	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.49	4e-101	369	Triticum aestivum	Ta.26388.1.A1_at	CD490617	-	-	3e-64	At3g28710	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please select
0.52	2e-125	448	Zea mays	Zm.5094.1.S1_at	AY104603.1	hypothetical protein LOC100280083	-	2e-100	At3g28715	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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