CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612186_at

Gene name hypothetical protein LOC100241494

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1612186_at CD800937 hypothetical protein LOC100241494 - 1e+1 At5g18250 unknown protein S.X. H.G.
0.43 61.5 1606987_at CF405059 hypothetical protein LOC100260919 - 1e+0 At2g31750 UGT74D1 (UDP-glucosyl transferase 74D1) S.X. H.G.
0.40 57.7 1618478_at CF515277 hypothetical protein LOC100259390 - 4e-3 At2g34850 MEE25 (maternal effect embryo arrest 25) S.X. H.G.
0.23 27.5 1621366_s_at CF204284.1 hypothetical protein LOC100259669 - 4e-1 At3g20450 - S.X. H.G.
0.07 7.8 1621009_s_at CF519017 - - 9e-2 At4g01590 unknown protein S.X. H.G.
0.06 6.8 1614440_at BQ796922 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase - 2e-53 At4g39980 DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.0 99.7 GSM299457 C_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.8 99.3 GSM299456 C_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.6 99.3 GSM299453 B_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6 96.0 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
3.3 95.2 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
3.1 94.6 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
3.0 94.2 GSM299454 B_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0 94.2 GSM436357 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
2.6 92.5 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 34 1617673_at CB003675 - - 3e-23 At2g01060 myb family transcription factor C.G. S.X.
0.03 3e-1 34 1613850_at CB003675 - - 3e-23 At2g01060 myb family transcription factor C.G. S.X.
0.03 3e-1 34 1611419_at CB912314 hypothetical protein LOC100242358 - 2e-9 At4g29130 HXK1 (HEXOKINASE 1) C.G. S.X.
0.02 1e+0 32 1620766_at CF609305 hypothetical protein LOC100249220 - 9e-18 At1g23000 heavy-metal-associated domain-containing protein C.G. S.X.
0.03 1e+0 32 1617489_at CA814844 - - 3e-2 At4g32970 unknown protein C.G. S.X.
0.03 1e+0 32 1613667_at CA814844 hypothetical protein LOC100260976 - 3e-2 At4g32970 unknown protein C.G. S.X.
0.04 1e+0 32 1613409_at CF372660 hypothetical protein LOC100267937 - 5e-1 At2g45520 unknown protein C.G. S.X.
0.03 4e+0 30 1622848_at CF568868 - - 1e-12 At2g06255 ELF4-L3 (ELF4-Like 3) C.G. S.X.
0.04 4e+0 30 1620513_at CB339511 - - 2e+0 At4g33565 protein binding / zinc ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana At5g18250 831943 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P - - - C.G. S.X.
0.05 4e-4 46 Glycine max Gma.660.1.S1_at BE823264 - - 1e+0 At2g43450 unknown protein C.G. S.X.
0.06 5e-1 34 Hordeum vulgare HS07H01u_x_at HS07H01u - - 5e+0 At5g43210 endo/excinuclease amino terminal domain-containing protein C.G. S.X.
0.03 8e+0 32 Oryza sativa OsAffx.2978.1.S1_at - - - 0 C.G. S.X.
0.06 1e-3 44 Populus trichocarpa PtpAffx.203189.1.S1_at pmrna6323 hypothetical protein - 2e+0 At3g45150 TCP16 (TCP domain protein 16) C.G. S.X.
0.05 4e+0 32 Triticum aestivum TaAffx.56306.1.S1_at CA654563 - - 1e+0 At4g10600 PHD finger family protein C.G. S.X.
0.03 7e+0 30 Zea mays Zm.9616.1.A1_at BM333833 hypothetical protein LOC100276315 - 5e+0 At5g35695 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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