Gene omics information

Query gene ID	1612176_at
Gene name	hypothetical protein LOC100250907
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.1	1612176_at	CF212948	hypothetical protein LOC100250907	-	5e-23	At3g17940	aldose 1-epimerase family protein	S.X.	H.G.	Please select
0.91	98.8	1607618_at	CB920876	hypothetical protein LOC100263508	-	3e-2	At3g14160	oxidoreductase	S.X.	H.G.	Please select
0.57	79.8	1607012_a_at	CF415679	similar to glucose-6-phosphate isomerase	-	1e+0	At4g08867	unknown protein	S.X.	H.G.	Please select
0.55	77.3	1610493_at	BQ799159	hypothetical protein LOC100242667	-	5e-47	At5g27720	emb1644 (embryo defective 1644)	S.X.	H.G.	Please select
0.30	39.4	1607536_s_at	CB982190	hypothetical protein LOC100258189	-	3e-11	At4g29850	unknown protein	S.X.	H.G.	Please select
0.23	27.5	1616476_at	CB340892	hypothetical protein LOC100252961	-	4e-13	At4g01710	CRK (CROOKED)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	97.2	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.9	96.6	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	5e-113	406	1608475_at	BG273937	-	-	4e-35	At4g02890	UBQ14	C.G.	S.X.	Please select
0.03	1e-5	50	1613939_at	CF605188	hypothetical protein LOC100245569	-	7e-4	At3g47800	aldose 1-epimerase family protein	C.G.	S.X.	Please select
0.02	2e-1	36	1612001_s_at	CF604676	hypothetical protein LOC100250868	-	2e-14	At1g59500	GH3.4	C.G.	S.X.	Please select
0.02	3e+0	32	1620289_at	CF510550	hypothetical protein LOC100250475	-	2e-11	At4g39090	RD19 (RESPONSIVE TO DEHYDRATION 19)	C.G.	S.X.	Please select
0.01	3e+0	32	1619409_at	CF212513	hypothetical protein LOC100241717	-	2e-51	At1g64190	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.02	3e+0	32	1618609_s_at	BQ800563	hypothetical protein LOC100249094	-	1e+0	At4g28556	RIC7	C.G.	S.X.	Please select
0.02	3e+0	32	1614009_at	BQ797920	hypothetical protein LOC100242045	-	4e-19	At1g14000	VIK (VH1-INTERACTING KINASE)	C.G.	S.X.	Please select
0.01	3e+0	32	1613436_at	CA818012	NAD(P)H-quinone oxidoreductase subunit M, chloroplastic	-	2e-3	At4g37925	NDH-M (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex)	C.G.	S.X.	Please select
0.02	3e+0	32	1613409_at	CF372660	hypothetical protein LOC100267937	-	5e-1	At2g45520	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	5e-23	109	Arabidopsis thaliana	At3g17940	820642	aldose 1-epimerase family protein	F:isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:cellular_component unknown;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.48	3e-53	210	Glycine max	GmaAffx.45873.2.S1_at	BG238974	-	-	1e-6	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please select
0.17	2e-8	59	Hordeum vulgare	Contig4392_at	Contig4392	-	-	5e-8	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please select
0.07	3e-7	57	Oryza sativa	Os10g0155500	AK061152.1	-	Aldose 1-epimerase-like protein	3e-10	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.45	3e-90	333	Populus trichocarpa	PtpAffx.5006.1.A1_at	CV260624	hypothetical protein	-	2e-9	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.17	5e-11	69	Triticum aestivum	Ta.9914.1.S1_at	CD373534	-	-	1e-5	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please select
0.04	7e-2	38	Zea mays	Zm.8850.1.A1_at	CO533203	hypothetical protein LOC100272618	-	4e-2	At3g17940	aldose 1-epimerase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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