Gene omics information

Query gene ID 1612122_at
Gene name hypothetical protein LOC100246317 /// hypothetical protein LOC100254873
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5980.61612122_atBQ800294hypothetical protein LOC100246317 /// hypothetical protein LOC100254873-1e-17At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)S.X.H.G.
0.5375.21606735_atCB970224hypothetical protein LOC100249353-4e+0At3g15420unknown proteinS.X.H.G.
0.4666.51613905_atCF210463hypothetical protein LOC100254141-3e-13At5g08160ATPK3S.X.H.G.
0.4666.51613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)S.X.H.G.
0.3853.61612431_atCA810329--1e+0At2g16720MYB7 (MYB DOMAIN PROTEIN 7)S.X.H.G.
0.3548.51608671_atCF511645hypothetical protein LOC100243213-1e+0At5g65609unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1.987.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
1.784.7GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.784.7GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.784.7GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
1.784.7GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.784.7GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
1.683.3GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
1.683.3GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-1341620162_atCD007840hypothetical protein LOC100266368-1e+0At3g07565DNA bindingC.G.S.X.
0.027e-1341617189_atCB004411--1e+0At4g00520-C.G.S.X.
0.017e-1341615352_s_atCB972821hypothetical protein LOC100248779-5e-138At4g13930SHM4 (serine hydroxymethyltransferase 4)C.G.S.X.
0.027e-1341614908_atCF413969--4e-1At2g33860ETT (ETTIN)C.G.S.X.
0.027e-1341613350_atCB004411--1e+0At4g00520-C.G.S.X.
0.027e-1341607546_atCD007840--1e+0At3g07565DNA bindingC.G.S.X.
0.023e+0321622406_atCB343386similar to LTA2 (PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE); dihydrolipoyllysine-residue acetyltransferase-5e-47At3g25860LTA2C.G.S.X.
0.023e+0321621860_atCB836556--1e+0At5g35300unknown proteinC.G.S.X.
0.023e+0321618450_atCA809366--3e-9At4g14965AtMAPR4 (Arabidopsis thaliana membrane-associated progesterone binding protein 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-1791Arabidopsis thalianaAt3g13870820600RHD3 (ROOT HAIR DEFECTIVE 3)required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.---C.G.S.X.
0.283e-62240Glycine maxGma.16346.1.S1_atBG044598--8e-12At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)C.G.S.X.
0.078e-857Hordeum vulgareContig6631_atContig6631--5e-1At1g72960root hair defective 3 GTP-binding (RHD3) family proteinC.G.S.X.
0.035e-654Oryza sativaOs01g0575000AK101859.1-Root hair defective 3 GTP-binding family protein1e-31At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)C.G.S.X.
0.212e-47190Populus trichocarpaPtp.6496.1.A1_s_atCV263678hypothetical protein-5e-20At3g13870RHD3 (ROOT HAIR DEFECTIVE 3)C.G.S.X.
0.032e-757Triticum aestivumTa.3311.1.S1_atBJ274103root hair defective 3 GTP-binding protein-1e-28At1g72960root hair defective 3 GTP-binding (RHD3) family proteinC.G.S.X.
0.105e-1581Zea maysZm.6156.1.S1_atCF005925protein SEY1-9e-3At1g72960root hair defective 3 GTP-binding (RHD3) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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