Gene omics information

Query gene ID	1612095_at
Gene name	hypothetical protein LOC100264474
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.99	100.0	1612095_at	CB978502	hypothetical protein LOC100264474	-	2e-10	At1g25440	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.52	73.9	1610420_at	CA816989	hypothetical protein LOC100263772	-	6e-30	At1g73060	unknown protein	S.X.	H.G.	Please select
0.49	69.3	1618616_at	CB343558	hypothetical protein LOC100259626	-	5e-10	At4g13670	PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)	S.X.	H.G.	Please select
0.48	68.8	1619186_at	CB345232	hypothetical protein LOC100246646	-	9e-2	At4g28030	GCN5-related N-acetyltransferase (GNAT) family protein	S.X.	H.G.	Please select
0.47	67.7	1609094_a_at	CD801602	hypothetical protein LOC100246766	-	1e+0	At1g10455	unknown protein	S.X.	H.G.	Please select
0.47	67.7	1613405_at	CF413625	hypothetical protein LOC100250386	-	5e-28	At3g62030	peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)	S.X.	H.G.	Please select
0.46	66.5	1613550_at	CF519120	hypothetical protein LOC100255002	-	1e-1	At5g19240	unknown protein	S.X.	H.G.	Please select
0.45	64.6	1616667_a_at	CB343534	similar to ribosomal protein L29 family protein /// hypothetical protein LOC100259766	-	7e-5	At5g65220	ribosomal protein L29 family protein	S.X.	H.G.	Please select
0.43	61.5	1622148_at	CB003815	hypothetical protein LOC100248028	-	4e-175	At5g36790	phosphoglycolate phosphatase, putative	S.X.	H.G.	Please select
0.42	60.1	1618750_at	CB971031	hypothetical protein LOC100241679	-	2e-50	At2g34860	EDA3 (embryo sac development arrest 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.4	99.4	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.7	99.3	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
6.1	98.7	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
6.0	98.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.7	98.5	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
4.8	97.8	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27
4.7	97.7	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
4.6	97.6	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
4.5	97.5	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
3.9	96.6	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	2e-5	48	1614061_at	CB973818	hypothetical protein LOC100264676	-	2e-14	At1g25440	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1622064_at	CF606041	R2R3 Myb14 transcription factor	-	6e-1	At1g50220	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1620599_at	CF414825	hypothetical protein LOC100246051 /// hypothetical protein LOC100256250	-	5e+0	At5g20290	40S ribosomal protein S8 (RPS8A)	C.G.	S.X.	Please select
0.02	1e+0	32	1614086_at	AF194173.1	alcohol dehydrogenase 1	-	3e-34	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	C.G.	S.X.	Please select
0.02	1e+0	32	1612360_at	CB970071	hypothetical protein LOC100244110	-	2e-152	At3g28710	H+-transporting two-sector ATPase, putative	C.G.	S.X.	Please select
0.02	4e+0	30	1622779_at	CD721742	-	-	8e+0	At5g52740	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.04	4e+0	30	1620857_at	CF207003.1	-	-	4e-2	At1g13635	methyladenine glycosylase family protein	C.G.	S.X.	Please select
0.02	4e+0	30	1618955_at	CD721742	-	-	8e+0	At5g52740	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.02	4e+0	30	1617624_at	CB970729	hypothetical protein LOC100260069	-	4e-11	At1g17370	UBP1B (oligouridylate binding protein 1B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	2e-10	65	Arabidopsis thaliana	At1g25440	839130	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:membrane;POB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	2e-27	123	Glycine max	Gma.11529.1.S1_at	CD409737	-	-	1e-10	At1g68520	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	EBro04_SQ003_C17_at	EBro04_SQ003_C17	-	-	3e+0	At5g63240	glycosyl hydrolase family protein 17	C.G.	S.X.	Please select
0.05	7e-3	42	Oryza sativa	Os02g0731700	AK120314.1	-	CONSTANS-like 1 protein	1e-6	At1g68520	zinc finger (B-box type) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	1e-18	93	Populus trichocarpa	PtpAffx.10843.2.A1_s_at	CV279576	hypothetical protein	-	2e-12	At1g68520	zinc finger (B-box type) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e+0	32	Triticum aestivum	TaAffx.142749.1.A1_at	CB412173	-	-	3e+1	At1g69080	universal stress protein (USP) family protein	C.G.	S.X.	Please select
0.03	9e-2	36	Zea mays	Zm.7275.1.A1_at	BM336395	hypothetical protein LOC100275154	-	8e-2	At5g58220	TTL (Transthyretin-Like protein)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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