CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1612091_at

Gene name hypothetical protein LOC100248801

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 83.2 1612091_at CF414325 hypothetical protein LOC100248801 - 1e-3 At1g44760 universal stress protein (USP) family protein S.X. H.G.
0.83 94.6 1617280_s_at CF373668 hypothetical protein LOC100258720 - 5e-3 At2g27385 unknown protein S.X. H.G.
0.76 91.5 1611748_s_at CB969590 similar to PDF - 1e-1 At2g42840 PDF1 (PROTODERMAL FACTOR 1) S.X. H.G.
0.73 90.8 1607851_at CF415102 hypothetical protein LOC100266538 - 9e-2 At1g04660 glycine-rich protein S.X. H.G.
0.73 90.8 1615603_at CB346190 - - 2e-1 At5g11770 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial S.X. H.G.
0.72 89.7 1615124_at CF514122 hypothetical protein LOC100258563 - 8e-5 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.71 89.5 1609418_s_at CF568955 hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538 - 4e+0 At5g35375 unknown protein S.X. H.G.
0.71 89.5 1613074_at CB969590 similar to PDF - 1e-1 At2g42840 PDF1 (PROTODERMAL FACTOR 1) S.X. H.G.
0.67 87.9 1613573_at CF609267 hypothetical protein LOC100260045 - 6e-33 At1g53860 remorin family protein S.X. H.G.
0.61 83.2 1619772_at CF205273.1 hypothetical protein LOC100260458 - 2e+0 At3g05070 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.7 99.3 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.1 98.7 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.9 98.6 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.7 98.5 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.4 98.3 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
5.3 98.2 GSM436405 V. riparia (VR, PI588259) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
5.3 98.2 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.2 98.2 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.2 98.2 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-2 36 1606443_at CF207585 - - 2e-1 At2g41540 GPDHC1 C.G. S.X.
0.03 1e+0 32 1622324_at CF568845 - - 1e-61 At5g61790 calnexin 1 (CNX1) C.G. S.X.
0.02 1e+0 32 1620349_at BQ799759 hypothetical protein LOC100263124 - 8e-7 At4g39860 unknown protein C.G. S.X.
0.03 1e+0 32 1619760_at CF415289 - - 3e-5 At1g61255 - C.G. S.X.
0.05 1e+0 32 1616658_at CD801940 - - 6e+0 At5g01075 beta-galactosidase C.G. S.X.
0.03 1e+0 32 1614230_at CB975652 hypothetical protein LOC100242492 /// hypothetical protein LOC100268090 - 2e+0 At1g65740 F-box family protein C.G. S.X.
0.02 1e+0 32 1611918_s_at CF603976 hypothetical protein LOC100259611 - 9e-86 At5g61790 calnexin 1 (CNX1) C.G. S.X.
0.03 1e+0 32 1611896_at CB347292 hypothetical protein LOC100255930 - 1e-6 At2g02040 PTR2 (PEPTIDE TRANSPORTER 2) C.G. S.X.
0.02 1e+0 32 1609226_at CF603976 hypothetical protein LOC100259611 - 9e-86 At5g61790 calnexin 1 (CNX1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-3 44 Arabidopsis thaliana At1g44760 841040 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PMO - - - C.G. S.X.
0.10 9e-11 67 Glycine max GmaAffx.25072.1.A1_at CD418032 - - 1e+1 At5g44306 unknown protein C.G. S.X.
0.11 8e-12 69 Hordeum vulgare Contig12939_at Contig12939 - - 4e-2 At1g44760 universal stress protein (USP) family protein C.G. S.X.
0.15 3e-11 69 Oryza sativa Os.26484.1.S1_at - - - 0 C.G. S.X.
0.19 1e-12 73 Populus trichocarpa PtpAffx.33154.1.S1_at CF233308 hypothetical protein - 2e-5 At1g44760 universal stress protein (USP) family protein C.G. S.X.
0.19 7e-14 77 Triticum aestivum Ta.1867.2.S1_a_at CA651333 - - 4e+0 At1g35230 AGP5 (ARABINOGALACTAN-PROTEIN 5) C.G. S.X.
0.12 1e-19 95 Zea mays Zm.4295.1.A1_at AI834391 universal stress protein family protein - 4e-2 At1g44760 universal stress protein (USP) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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