Gene omics information

Query gene ID	1612087_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.56	79.4	1612087_at	CB339591	-	-	2e+0	At2g28140	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1610461_at	CF514657	-	-	2e-1	At1g03030	phosphoribulokinase/uridine kinase family protein	S.X.	H.G.	Please select
0.50	72.7	1617335_at	CF207178	-	-	4e-1	At2g18410	unknown protein	S.X.	H.G.	Please select
0.47	67.7	1621367_at	CF210106	-	-	1e+0	At2g29440	ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)	S.X.	H.G.	Please select
0.44	64.1	1622240_x_at	CF202008.1	-	-	7e+0	At5g37580	-	S.X.	H.G.	Please select
0.14	14.4	1619679_at	CB977224	-	-	1e+0	At3g15690	biotin carboxyl carrier protein of acetyl-CoA carboxylase-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.1	99.1	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
6.9	99.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
5.1	98.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
5.0	98.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
4.5	97.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
4.4	97.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.3	97.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.6	96.0	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.6	96.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.4	95.5	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.75	5e-118	422	1614841_at	CB979453	-	-	6e+0	At5g01610	unknown protein	C.G.	S.X.	Please select
0.42	9e-24	109	1617966_at	CF516835	-	-	4e+0	At5g01610	unknown protein	C.G.	S.X.	Please select
0.14	4e-23	107	1619690_at	CB975062	-	-	9e-1	At5g49800	-	C.G.	S.X.	Please select
0.31	1e-16	85	1607197_at	CB348202	-	-	4e+0	At3g48180	unknown protein	C.G.	S.X.	Please select
0.11	5e-16	83	1621560_at	CB002361	-	-	4e+0	At4g29820	CFIM-25	C.G.	S.X.	Please select
0.09	5e-16	83	1611849_at	CB342651	-	-	1e+0	At1g49740	phospholipase C/ phosphoric diester hydrolase	C.G.	S.X.	Please select
0.11	5e-16	83	1608959_at	CB002361	-	-	4e+0	At4g29820	CFIM-25	C.G.	S.X.	Please select
0.11	8e-15	79	1610461_at	CF514657	-	-	2e-1	At1g03030	phosphoribulokinase/uridine kinase family protein	C.G.	S.X.	Please select
0.16	3e-14	77	1614379_at	CB982376	-	-	2e-1	At1g17150	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	34	Arabidopsis thaliana	At2g28140	817360	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	34	Glycine max	GmaAffx.49442.1.A1_at	BE820149	-	-	2e+0	At5g09680	cytochrome b5 domain-containing protein	C.G.	S.X.	Please select
0.03	7e-1	34	Hordeum vulgare	HV05C10u_at	HV05C10u	-	-	3e+0	At5g15760	plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative	C.G.	S.X.	Please select
0.02	7e-1	36	Oryza sativa	Os03g0162000	AK072466.1	-	Dimethylaniline monooxygenase-like protein(Flavin-containing monooxygenase YUCCA)	1e-1	At2g33230	flavin-containing monooxygenase, putative / FMO, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.225607.1.S1_s_at	pmrna45066	hypothetical protein	-	2e-2	At1g61460	S-locus protein kinase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	34	Triticum aestivum	TaAffx.110903.1.S1_at	CA651960	-	-	1e+0	At2g34850	MEE25 (maternal effect embryo arrest 25)	C.G.	S.X.	Please select
0.02	3e+0	32	Zea mays	Zm.15858.1.A1_at	CF244298	Hypothetical protein LOC100216909	-	3e-2	At1g75510	transcription initiation factor IIF beta subunit (TFIIF-beta) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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