Gene omics information

Query gene ID	1611997_at
Gene name	hypothetical protein LOC100249691
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	83.2	1611997_at	CA812801	hypothetical protein LOC100249691	-	4e-2	At5g55660	-	S.X.	H.G.	Please select
0.52	73.9	1611218_at	CB912267	hypothetical LOC100261590	-	3e-1	At1g66360	C2 domain-containing protein	S.X.	H.G.	Please select
0.46	66.5	1618098_at	CB979528	hypothetical protein LOC100244989	-	8e-1	At5g63135	unknown protein	S.X.	H.G.	Please select
0.43	61.5	1617258_at	CF516015	hypothetical protein LOC100245053	-	4e+0	At5g23060	CaS (Calcium sensing receptor)	S.X.	H.G.	Please select
0.43	61.5	1614642_at	CF205407.1	-	-	6e+0	At5g53730	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	S.X.	H.G.	Please select
0.40	57.7	1615091_at	CD801426	hypothetical protein LOC100242289	-	2e-2	At1g13770	-	S.X.	H.G.	Please select
0.33	45.7	1619134_at	CB971759	-	-	2e+0	At5g53720	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.33	45.7	1606676_at	CF403737	hypothetical protein LOC100245560	-	9e-2	At1g05060	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1612717_s_at	CA814430	hypothetical protein LOC100259033	-	1e+0	At1g01225	NC domain-containing protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.5	97.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.3	97.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
4.0	96.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.8	96.4	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.8	96.4	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.7	96.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.7	96.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.7	96.2	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.7	96.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.6	96.0	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-1	36	1622102_at	CD010899	-	-	1e+0	At5g04047	-	C.G.	S.X.	Please select
0.03	2e-1	36	1618352_at	CA817744	hypothetical protein LOC100255155	-	2e-8	At3g52040	unknown protein	C.G.	S.X.	Please select
0.01	2e-1	36	1614048_at	CF514124	hypothetical protein LOC100267928	-	1e-45	At3g12860	nucleolar protein Nop56, putative	C.G.	S.X.	Please select
0.02	2e-1	36	1609493_at	CD010899	-	-	1e+0	At5g04047	-	C.G.	S.X.	Please select
0.02	8e-1	34	1622498_at	CB008142	hypothetical protein LOC100246909	-	2e-39	At1g62040	ATG8C (autophagy 8c)	C.G.	S.X.	Please select
0.02	8e-1	34	1621064_at	CF405867	hypothetical protein LOC100262163	-	2e-1	At5g46490	disease resistance protein (TIR-NBS class), putative	C.G.	S.X.	Please select
0.02	8e-1	34	1611829_at	CF404908	hypothetical protein LOC100263659	-	6e-2	At3g48880	F-box family protein	C.G.	S.X.	Please select
0.02	8e-1	34	1608378_at	CB346353	-	-	2e-1	At2g41410	calmodulin, putative	C.G.	S.X.	Please select
0.02	3e+0	32	1622581_at	CF208711	-	-	2e-1	At5g44820	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-2	40	Arabidopsis thaliana	At5g55660	835660	-	F:unknown;P:unknown;C:mitochondrion;MOFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-2	42	Glycine max	PsAffx.C45000006_at	PsAffx.C45000006	-	-	3e+0	At5g08535	D111/G-patch domain-containing protein	C.G.	S.X.	Please select
0.02	3e-1	36	Hordeum vulgare	Contig21792_at	Contig21792	-	-	3e-1	At4g10895	Expressed protein	C.G.	S.X.	Please select
0.02	3e-1	38	Oryza sativa	OsAffx.3165.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-2	40	Populus trichocarpa	PtpAffx.73535.1.S1_at	BI069260	hypothetical protein	-	4e-5	At3g48710	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	7e-1	36	Triticum aestivum	TaAffx.119035.1.A1_at	BJ295436	-	-	1e+0	At2g13720	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	C.G.	S.X.	Please select
0.02	7e-2	38	Zea mays	ZmAffx.302.1.A1_at	AI670435	-	-	8e-1	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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