Gene omics information

Query gene ID 1611813_s_at
Gene name hypothetical protein LOC100260422
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81611813_s_atBQ794797hypothetical protein LOC100260422-1e-6At5g60460sec61beta family proteinS.X.H.G.
0.6183.21611545_atCB972050hypothetical protein LOC100260759-2e-14At1g76200unknown proteinS.X.H.G.
0.6081.91613705_atCF517167hypothetical protein LOC100264130-4e-27At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)S.X.H.G.
0.5072.71620903_atCF605711hypothetical protein LOC100260422-2e-12At5g60460sec61beta family proteinS.X.H.G.
0.3243.11608813_s_atBQ795140hypothetical protein LOC100255523-5e-84At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)S.X.H.G.
0.2225.61614112_atBQ797230hypothetical protein LOC100252349-3e-11At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.194.6GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436374Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436377Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM436397V. riparia (VR, PI588259) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6606321620903_atCF605711hypothetical protein LOC100260422-2e-12At5g60460sec61beta family proteinC.G.S.X.
0.027e-2361607360_atCB342405hypothetical protein LOC100246988-2e-47At1g78510SPS1 (solanesyl diphosphate synthase 1)C.G.S.X.
0.031e+0321618387_atCF215295hypothetical protein LOC100249044-4e-25At2g01970endomembrane protein 70, putativeC.G.S.X.
0.015e+0301619642_atCF512453hypothetical protein LOC100241575-3e-28At3g10340PAL4 (Phenylalanine ammonia-lyase 4)C.G.S.X.
0.035e+0301619512_s_atCD009782--1e-3At5g22060ATJ2C.G.S.X.
0.035e+0301613230_atCB343417hypothetical protein LOC100250421-1e+0At1g47820unknown proteinC.G.S.X.
0.025e+0301613038_s_atCA818530--2e-3At5g22060ATJ2C.G.S.X.
0.025e+0301609170_atCF516552similar to 40S ribosomal S4 protein-3e-110At5g5842040S ribosomal protein S4 (RPS4D)C.G.S.X.
0.012e+1281622770_atCF209970hypothetical protein LOC100259874-3e-22At1g64390AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-654Arabidopsis thalianaAt5g60460836167sec61beta family proteinF:protein transporter activity;P:protein transport;C:plasma membrane;MFPOB---C.G.S.X.
0.082e-550Glycine maxGma.5350.1.S1_s_atAW351218--6e-18At5g60460sec61beta family proteinC.G.S.X.
0.093e-857Hordeum vulgareHZ42D16r_s_atHZ42D16r--4e-3At5g60460sec61beta family proteinC.G.S.X.
0.083e-550Oryza sativaOs12g0103300AU222596-Protein transport protein SEC61 beta subunit4e-3At5g60460sec61beta family proteinC.G.S.X.
0.082e-963Populus trichocarpaPtpAffx.18075.1.S1_atCV278430--2e-12At5g60460sec61beta family proteinC.G.S.X.
0.063e-446Triticum aestivumTa.12797.1.S1_atCA652314--4e-4At5g60460sec61beta family proteinC.G.S.X.
0.083e-548Zea maysZm.16986.1.S1_atCF632581protein transport protein Sec61 beta subunit-2e-2At5g60460sec61beta family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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