Gene omics information

Query gene ID	1611799_at
Gene name	hypothetical protein LOC100255639
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.9	1611799_at	CB982194	hypothetical protein LOC100255639	-	4e-4	At5g06700	unknown protein	S.X.	H.G.	Please select
0.50	72.7	1613480_at	CF403988	hypothetical protein LOC100247977	-	3e+0	At2g02835	-	S.X.	H.G.	Please select
0.27	34.0	1616394_at	CB344590	hypothetical protein LOC100267852	-	1e+0	At3g51830	ATG5	S.X.	H.G.	Please select
0.27	34.0	1619005_at	CF206493.1	-	-	3e-14	At5g46410	NLI interacting factor (NIF) family protein	S.X.	H.G.	Please select
0.23	27.5	1616171_at	BM437490	hypothetical protein LOC100251471	-	3e-18	At5g48380	leucine-rich repeat family protein / protein kinase family protein	S.X.	H.G.	Please select
0.15	15.6	1610599_at	CF211001	hypothetical protein LOC100250338	-	7e+0	At5g16790	-	S.X.	H.G.	Please select
0.14	14.4	1622116_at	BQ793439	hypothetical protein LOC100264025	-	4e-2	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.7	96.2	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
3.5	95.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.2	94.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.0	94.2	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
2.9	93.8	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.8	93.4	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.8	93.4	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.6	92.5	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-6	52	1621570_at	CB339408	hypothetical protein LOC100255693	-	4e-5	At2g34070	unknown protein	C.G.	S.X.	Please select
0.04	3e-2	38	1620965_at	CB970864	-	-	7e-14	At2g34070	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	1619544_at	CK138178.1	-	-	7e-24	At5g17020	XPO1A	C.G.	S.X.	Please select
0.02	1e-1	36	1617336_at	CB342674	hypothetical protein LOC100262536	-	2e-4	At2g30900	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	36	1612885_at	CF208478	hypothetical protein LOC100263882	-	2e-3	At5g58600	PMR5 (POWDERY MILDEW RESISTANT 5)	C.G.	S.X.	Please select
0.03	1e-1	36	1610808_at	CF207450	-	-	9e+0	At5g04350	self-incompatibility protein-related	C.G.	S.X.	Please select
0.02	1e-1	36	1606885_at	CK138178.1	-	-	7e-24	At5g17020	XPO1A	C.G.	S.X.	Please select
0.02	1e-1	36	1606743_at	CF210771	hypothetical protein LOC100250210	-	4e-1	At5g23260	TT16 (TRANSPARENT TESTA16)	C.G.	S.X.	Please select
0.04	5e-1	34	1622679_at	CD798070	hypothetical protein LOC100257992	-	1e-20	At5g06220	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	4e-4	46	Arabidopsis thaliana	At5g06700	830559	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	3e-18	93	Glycine max	Gma.2477.1.S1_at	BE820356	-	-	1e-7	At5g06700	unknown protein	C.G.	S.X.	Please select
0.06	5e-2	38	Hordeum vulgare	Contig25401_s_at	Contig25401	-	-	4e-3	At1g78710	unknown protein	C.G.	S.X.	Please select
0.05	4e-9	63	Oryza sativa	OsAffx.5650.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	2e-7	57	Populus trichocarpa	PtpAffx.52013.2.S1_at	BU874011	hypothetical protein	-	4e-14	At3g12060	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	1e-7	57	Triticum aestivum	Ta.3521.2.S1_at	CA501352	-	-	8e-1	At1g78710	unknown protein	C.G.	S.X.	Please select
0.05	4e-2	38	Zea mays	Zm.18295.1.A1_at	CK827633	hypothetical protein LOC100193247	-	2e-3	At2g34070	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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