CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611755_at

Gene name hypothetical protein LOC100246670

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 95.4 1611755_at CB918301 hypothetical protein LOC100246670 - 4e-27 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) S.X. H.G.
0.67 87.9 1614881_at CF210464 hypothetical protein LOC100261031 - 1e-153 At5g08670 ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism S.X. H.G.
0.67 87.9 1610327_at CB972987 hypothetical protein LOC100259544 - 3e-160 At5g08690 ATP synthase beta chain 2, mitochondrial S.X. H.G.
0.47 67.7 1609881_at BQ792085 26S proteasome regulatory subunit - 3e-169 At1g53750 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) S.X. H.G.
0.46 66.5 1619827_at CF215908 hypothetical protein LOC100245612 - 1e-27 At5g63400 ADK1 (ADENYLATE KINASE 1) S.X. H.G.
0.38 53.6 1608146_at CF415273 hypothetical protein LOC100253931 - 3e-14 At1g47420 - S.X. H.G.
0.27 34.0 1612829_at BQ797707 hypothetical protein LOC100247114 - 2e-93 At4g34720 AVA-P1 S.X. H.G.
0.26 32.0 1609752_at CF213671 hypothetical protein LOC100257494 - 2e-43 At5g13430 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
2.6 92.5 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
2.5 91.9 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
2.4 91.3 GSM287889 Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.4 91.3 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
2.4 91.3 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
2.3 90.7 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
2.2 89.9 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
2.1 89.1 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 4e-58 224 1620906_s_at CB972641 hypothetical protein LOC100246670 - 2e+0 At1g32630 unknown protein C.G. S.X.
0.02 5e-2 38 1616737_at CD713024 - - 5e+0 At3g19663 unknown protein C.G. S.X.
0.02 5e-2 38 1612903_at CD713024 - - 5e+0 At3g19663 unknown protein C.G. S.X.
0.01 8e-1 34 1621273_at CB009035 - - 3e-15 At1g30220 INT2 (INOSITOL TRANSPORTER 2) C.G. S.X.
0.02 8e-1 34 1621203_at CF515455 - - 1e+0 At5g07600 oleosin / glycine-rich protein C.G. S.X.
0.02 8e-1 34 1620255_at CF204030.1 hypothetical protein LOC100246301 - 2e-12 At1g30220 INT2 (INOSITOL TRANSPORTER 2) C.G. S.X.
0.01 8e-1 34 1616798_s_at CB009035 hypothetical protein LOC100246301 - 3e-15 At1g30220 INT2 (INOSITOL TRANSPORTER 2) C.G. S.X.
0.01 8e-1 34 1611383_at CB009035 hypothetical protein LOC100246301 - 3e-15 At1g30220 INT2 (INOSITOL TRANSPORTER 2) C.G. S.X.
0.01 3e+0 32 1617921_at CF212447 hypothetical protein LOC100259500 - 6e-93 At2g23080 casein kinase II alpha chain, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 4e-27 123 Arabidopsis thaliana At2g33040 817866 ATP synthase gamma chain, mitochondrial (ATPC) F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:in 7 components;OBMFPA - - - C.G. S.X.
0.48 7e-51 202 Glycine max Gma.17344.1.S1_at CD409198 - - 7e-41 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.31 8e-33 141 Hordeum vulgare Contig2722_at Contig2722 - - 2e-32 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.36 5e-31 137 Oryza sativa Os.10703.2.S1_x_at - - - 0 C.G. S.X.
0.37 2e-97 357 Populus trichocarpa PtpAffx.249.66.A1_s_at CV227553 hypothetical protein - 2e-52 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.24 2e-35 151 Triticum aestivum Ta.14480.2.S1_at BU099921 - - 3e-28 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.32 5e-52 204 Zea mays Zm.5289.2.A1_a_at AI600945 hypothetical protein LOC100274172 - 1e-30 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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