CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611691_s_at

Gene name hypothetical protein LOC100265089

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1611691_s_at CB980403 hypothetical protein LOC100265089 - 6e-59 At5g36290 unknown protein S.X. H.G.
0.67 87.9 1610828_at CB974880 hypothetical protein LOC100252326 - 3e-5 At5g46750 AGD9 (ARF-GAP DOMAIN 9) S.X. H.G.
0.55 77.3 1609966_a_at BQ798735 hypothetical protein LOC100249980 /// hypothetical protein LOC100245503 - 3e-1 At3g01090 AKIN10 (Arabidopsis SNF1 kinase homolog 10) S.X. H.G.
0.40 57.7 1618184_at BQ795140 hypothetical protein LOC100255523 - 5e-84 At1g78870 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35) S.X. H.G.
0.22 25.6 1614241_at CF209157 hypothetical protein LOC100255909 - 7e-6 At1g14685 BPC2 (BASIC PENTACYSTEINE 2) S.X. H.G.
0.15 15.6 1619248_at CA813733 hypothetical protein LOC100264750 - 3e-1 At5g18100 CSD3 (copper/zinc superoxide dismutase 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.1 96.9 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-2 38 1607113_at CD801708 hypothetical protein LOC100247516 - 4e-1 At5g67490 unknown protein C.G. S.X.
0.02 5e-1 34 1622174_at CB912233 hypothetical protein LOC100241032 - 5e+0 At4g38090 unknown protein C.G. S.X.
0.02 5e-1 34 1609564_at CB912233 - - 5e+0 At4g38090 unknown protein C.G. S.X.
0.02 2e+0 32 1619767_at BQ797930 hypothetical protein LOC100251717 - 6e-13 At2g37240 - C.G. S.X.
0.02 2e+0 32 1616422_at CB349476 hypothetical protein LOC100251131 - 4e-22 At3g15880 protein binding C.G. S.X.
0.02 2e+0 32 1616155_at CA817917 - - 4e+0 At5g53205 unknown protein C.G. S.X.
0.02 2e+0 32 1616023_at CB979152 hypothetical protein LOC100252512 - 1e-38 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.02 2e+0 32 1615030_at CB350066 similar to EMB2735 (EMBRYO DEFECTIVE 2735) - 1e-16 At5g06240 emb2735 (embryo defective 2735) C.G. S.X.
0.02 2e+0 32 1613542_at CF209028 - - 2e+0 At5g50370 adenylate kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 6e-59 228 Arabidopsis thaliana At5g36290 833627 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BMOPFA - - - C.G. S.X.
0.51 1e-94 347 Glycine max Gma.10004.1.S1_at BF070937 - - 6e-25 At5g36290 unknown protein C.G. S.X.
0.14 2e-26 119 Hordeum vulgare Contig14363_at Contig14363 - - 4e-8 At5g36290 unknown protein C.G. S.X.
0.35 2e-38 161 Oryza sativa Os08g0528500 AK111028.1 - Protein of unknown function UPF0016 family protein 3e-2 At5g36290 unknown protein C.G. S.X.
0.52 7e-149 527 Populus trichocarpa PtpAffx.6482.1.S1_at CV260043 predicted membrane protein - 4e-82 At5g36290 unknown protein C.G. S.X.
0.16 9e-15 81 Triticum aestivum Ta.9324.2.S1_a_at CA659465 - - 4e-4 At5g36290 unknown protein C.G. S.X.
0.20 5e-36 151 Zea mays Zm.5147.1.A1_at CK787170 - - 2e-25 At5g36290 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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