CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611686_at

Gene name hypothetical protein LOC100255085

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 67.7 1611686_at CB969423 hypothetical protein LOC100255085 - 7e+0 At5g26080 proline-rich family protein S.X. H.G.
0.60 81.9 1612140_at CD798360 hypothetical protein LOC100254487 - 1e-17 At1g03250 unknown protein S.X. H.G.
0.43 61.5 1613440_at CB976741 hypothetical protein LOC100252018 - 4e-10 At1g53450 unknown protein S.X. H.G.
0.40 57.7 1613801_at CF514247 hypothetical protein LOC100240794 - 1e+0 At3g59960 ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4) S.X. H.G.
0.16 16.7 1606507_at CF369116 hypothetical protein LOC100243767 - 4e+0 At5g39520 unknown protein S.X. H.G.
0.13 13.3 1612988_at CB978708 hypothetical protein LOC100265359 - 6e-29 At5g21090 leucine-rich repeat protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.6 96.0 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.0 94.2 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
2.8 93.4 GSM322369 genotype: Incrocio Manzoni - disease type: Healthy - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.8 93.4 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
2.8 93.4 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7 93.0 GSM322363 genotype: Chardonnay - disease type: Bois Noir infected - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.7 93.0 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
2.5 91.9 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
2.5 91.9 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.4 91.3 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 32 1620193_at CA816858 hypothetical protein LOC100242947 - 1e-32 At5g38660 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) C.G. S.X.
0.01 2e+0 32 1619183_at CA814661 hypothetical protein LOC100251027 - 4e-21 At4g27600 pfkB-type carbohydrate kinase family protein C.G. S.X.
0.02 2e+0 32 1617626_at CF203610.1 hypothetical protein LOC100249096 - 3e-23 At2g20100 ethylene-responsive family protein C.G. S.X.
0.02 2e+0 32 1617152_at CF206449.1 - - 9e-8 At1g53710 hydrolase/ protein serine/threonine phosphatase C.G. S.X.
0.01 2e+0 32 1615008_at AY036906.1 similar to Hsp70 interacting protein/thioredoxin chimera - 1e-8 At3g17880 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN) C.G. S.X.
0.02 2e+0 32 1613683_at CB976586 hypothetical protein LOC100255739 - 7e-15 At1g47560 unknown protein C.G. S.X.
0.03 2e+0 32 1613709_at CD797642 - - 3e+0 At4g01915 unknown protein C.G. S.X.
0.02 2e+0 32 1612942_at CF512628 - - 4e-1 At5g20640 unknown protein C.G. S.X.
0.02 2e+0 32 1612698_a_at CA816858 hypothetical protein LOC100242947 - 1e-32 At5g38660 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At5g26080 832677 proline-rich family protein F:unknown;P:unknown;C:endomembrane system;MPBOFVA - - - C.G. S.X.
0.03 4e-2 40 Glycine max Gma.8004.1.A1_s_at BU547125 - - 1e-6 At5g42080 ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN) C.G. S.X.
0.03 6e-2 38 Hordeum vulgare Contig9769_at Contig9769 - - 3e-23 At2g30000 - C.G. S.X.
0.03 4e+0 34 Oryza sativa OsAffx.7710.1.S1_at - - - 0 C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.80063.3.A1_s_at DN492066 hypothetical protein - 4e-10 At5g48630 cyclin family protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum TaAffx.30401.1.S1_at CA625586 - - 1e+0 At2g01890 PAP8 (PURPLE ACID PHOSPHATASE 8) C.G. S.X.
0.02 1e+1 30 Zea mays ZmAffx.163.1.A1_at AI668189 pyrimidine-specific ribonucleoside hydrolase rihB - 8e-1 At5g55240 caleosin-related family protein / embryo-specific protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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