CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611681_at

Gene name hypothetical protein LOC100241604

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.6 1611681_at CF513131 hypothetical protein LOC100241604 - 4e+0 At5g39360 EDL2 (EID1-like 2) S.X. H.G.
0.16 16.7 1610836_at CF208642 hypothetical protein LOC100257386 - 5e-10 At4g16760 ACX1 (ACYL-COA OXIDASE 1) S.X. H.G.
0.14 14.4 1616489_s_at BQ800343 hypothetical protein LOC100267925 - 7e-12 At2g14910 unknown protein S.X. H.G.
0.13 13.3 1612816_at CB001913 hypothetical protein LOC100259862 - 6e+0 At4g05530 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1) S.X. H.G.
0.12 12.1 1616034_at CA817525 similar to BTB/POZ domain-containing protein - 4e-23 At4g08455 BTB/POZ domain-containing protein S.X. H.G.
0.07 7.8 1618880_at CF214283 hypothetical protein LOC100241859 - 1e-17 At4g27750 ISI1 (IMPAIRED SUCROSE INDUCTION 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.4 97.3 GSM299453 B_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.9 96.6 GSM299456 C_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.4 95.5 GSM299454 B_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2 94.9 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.1 94.6 GSM299459 D_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.1 94.6 GSM299452 B_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9 93.8 GSM299457 C_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5 91.9 GSM299451 B_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4 91.3 GSM436429 V. riparia (VR, PI588259) SD, 13h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM299455 C_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-21 101 1616365_at CF513052 hypothetical protein LOC100241604 - 4e+0 At5g39360 EDL2 (EID1-like 2) C.G. S.X.
0.04 1e+0 32 1611235_at CF208810 - - 1e-10 At3g23980 unknown protein C.G. S.X.
0.03 5e+0 30 1620407_at BQ796296 hypothetical protein LOC100249546 - 1e+0 At1g66550 WRKY67 C.G. S.X.
0.03 5e+0 30 1616912_at CF212478 hypothetical protein LOC100246170 - 6e-6 At3g55600 - C.G. S.X.
0.03 5e+0 30 1614168_at CF212423 hypothetical protein LOC100249810 - 5e+0 At5g41685 mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1) C.G. S.X.
0.01 5e+0 30 1614093_s_at CB980813 - - 3e+0 At5g47650 ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2) C.G. S.X.
0.02 5e+0 30 1612876_at CB916611 hypothetical protein LOC100262591 - 7e-15 At1g49960 xanthine/uracil permease family protein C.G. S.X.
0.03 5e+0 30 1612592_at CF511283 - - 4e+0 At5g33806 unknown protein C.G. S.X.
0.02 5e+0 30 1610372_at CB007734 - - 1e-7 At1g19180 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g39360 833932 EDL2 (EID1-like 2) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.78006.1.S1_at BM177206 - - 8e-1 At5g49525 unknown protein C.G. S.X.
0.04 8e+0 30 Hordeum vulgare HVSMEi0016B10r2_at HVSMEi0016B10r2 - - 1e-1 At2g25500 - C.G. S.X.
0.03 8e+0 32 Oryza sativa Os09g0570200 CR291009 - Zn-finger, C2H2 type domain containing protein 4e+0 At2g03040 transmembrane protein-related C.G. S.X.
0.04 5e+0 32 Populus trichocarpa PtpAffx.37230.1.A1_at CV260036 - - 3e+0 At2g44340 VQ motif-containing protein C.G. S.X.
0.04 4e+0 32 Triticum aestivum Ta.17209.2.S1_at CA618794 - - 1e+0 At2g41905 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.2279.1.S1_at BF728020 - - 2e-2 At3g54010 PAS1 (PASTICCINO 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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