Gene omics information

Query gene ID	1611650_at
Gene name	hypothetical protein LOC100244122
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.8	1611650_at	CA808599	hypothetical protein LOC100244122	-	3e-26	At2g23320	WRKY15	S.X.	H.G.	Please select
0.73	90.8	1610064_at	CB341653	similar to DNA-binding protein	-	3e-19	At2g38470	WRKY33	S.X.	H.G.	Please select
0.57	79.8	1611285_s_at	CA809190	similar to DNA-binding protein	-	3e-22	At4g31550	WRKY11	S.X.	H.G.	Please select
0.46	66.5	1622399_at	CF206628.1	similar to DNA-binding protein	-	2e-27	At4g31550	WRKY11	S.X.	H.G.	Please select
0.40	57.7	1615010_at	CF406012	hypothetical protein LOC100260856	-	8e-3	At4g15120	VQ motif-containing protein	S.X.	H.G.	Please select
0.21	24.0	1621920_at	CD797740	hypothetical protein LOC100251510	-	8e-3	At1g68490	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.8	99.3	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
7.3	99.2	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.9	97.9	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.8	97.8	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.4	97.3	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.4	97.3	GSM436391	V. riparia (VR, PI588259) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.67	4e-168	589	1612649_s_at	CA809370	hypothetical protein LOC100244122	-	1e-6	At3g04670	WRKY39	C.G.	S.X.	Please select
0.14	9e-18	89	1612237_at	BQ795624	-	-	8e-11	At4g24240	WRKY7	C.G.	S.X.	Please select
0.15	5e-16	83	1619424_at	BQ800205	hypothetical protein LOC100267695	-	5e-9	At4g23550	WRKY29	C.G.	S.X.	Please select
0.19	2e-9	61	1611285_s_at	CA809190	similar to DNA-binding protein	-	3e-22	At4g31550	WRKY11	C.G.	S.X.	Please select
0.15	3e-8	57	1622399_at	CF206628.1	similar to DNA-binding protein	-	2e-27	At4g31550	WRKY11	C.G.	S.X.	Please select
0.03	2e-6	52	1610066_at	BQ798633	hypothetical protein LOC100265970	-	9e-2	At3g01700	AGP11	C.G.	S.X.	Please select
0.05	3e-5	48	1610254_at	CF517943	hypothetical protein LOC100266073	-	2e-5	At4g16530	unknown protein	C.G.	S.X.	Please select
0.02	1e-4	46	1621570_at	CB339408	hypothetical protein LOC100255693	-	4e-5	At2g34070	unknown protein	C.G.	S.X.	Please select
0.04	5e-4	44	1609629_at	CF606022	hypothetical protein LOC100250476	-	3e-17	At5g13330	Rap2.6L (related to AP2 6L)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	3e-26	119	Arabidopsis thaliana	At2g23320	816864	WRKY15	Encodes WRKY DNA-binding protein 15 (WRKY15).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.39	1e-32	141	Glycine max	Gma.14035.1.A1_at	CD414105	WRKY14 protein	-	9e-23	At2g23320	WRKY15	C.G.	S.X.	Please select
0.12	1e-5	50	Hordeum vulgare	Contig7798_at	Contig7798	-	-	7e-13	At4g31550	WRKY11	C.G.	S.X.	Please select
0.07	1e-5	52	Oryza sativa	Os04g0605100	AK072938.1	-	WRKY transcription factor 68	7e-22	At4g31550	WRKY11	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.25	3e-30	133	Populus trichocarpa	PtpAffx.54256.2.A1_s_at	CV229094	hypothetical protein	-	8e-33	At4g24240	WRKY7	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e-1	38	Triticum aestivum	Ta.25722.1.A1_at	CD374046	-	-	2e-2	At2g30590	WRKY21	C.G.	S.X.	Please select
0.15	7e-4	44	Zea mays	Zm.9098.1.A1_a_at	BM336161	Hypothetical protein LOC100192894	-	6e-6	At4g31550	WRKY11	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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