Gene omics information

Query gene ID	1611458_at
Gene name	hypothetical protein LOC100243644
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.8	1611458_at	CF207715	hypothetical protein LOC100243644	-	2e-18	At2g35530	bZIP transcription factor family protein	S.X.	H.G.	Please select
0.75	91.3	1608653_at	CB975644	hypothetical protein LOC100263217	-	5e+0	At4g15020	DNA binding / protein dimerization	S.X.	H.G.	Please select
0.67	87.9	1622765_at	CF405914	-	-	4e+0	At3g59450	calcium-binding EF hand family protein	S.X.	H.G.	Please select
0.61	83.2	1617655_at	CB348593	hypothetical protein LOC100262391	-	5e-10	At3g16620	ATTOC120	S.X.	H.G.	Please select
0.53	75.2	1620494_at	CF414991	-	-	1e+0	At5g55190	RAN3 (RAN GTPASE 3)	S.X.	H.G.	Please select
0.53	75.2	1616867_at	CF405655	hypothetical protein LOC100254223	-	2e-17	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	S.X.	H.G.	Please select
0.53	75.2	1617406_s_at	CF415339	hypothetical protein LOC100266010	-	2e-8	At3g07220	transcriptional activator, putative	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.0	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436402	V. riparia (VR, PI588259) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-2	38	1611193_at	CF609588	hypothetical protein LOC100250676	-	8e-9	At2g35530	bZIP transcription factor family protein	C.G.	S.X.	Please select
0.01	2e+0	32	1616276_at	CD009185	hypothetical protein LOC100240927	-	0	At5g48300	ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1)	C.G.	S.X.	Please select
0.02	2e+0	32	1610595_at	CB004179	-	-	5e+0	At5g52000	IMPA-8 (IMPORTIN ALPHA ISOFORM 8)	C.G.	S.X.	Please select
0.02	2e+0	32	1606775_at	CB004179	-	-	5e+0	At5g52000	IMPA-8 (IMPORTIN ALPHA ISOFORM 8)	C.G.	S.X.	Please select
0.02	8e+0	30	1622181_at	CA808206	hypothetical protein LOC100253653	-	3e-19	At1g14410	WHY1 (WHIRLY 1)	C.G.	S.X.	Please select
0.02	8e+0	30	1620027_at	CF214601	similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein	-	6e-25	At1g62390	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.02	8e+0	30	1619822_at	CD721641	-	-	1e+0	At1g50280	phototropic-responsive NPH3 family protein	C.G.	S.X.	Please select
0.02	8e+0	30	1618746_at	CF516441	-	-	4e+0	At5g57760	unknown protein	C.G.	S.X.	Please select
0.01	8e+0	30	1618491_s_at	CB974861	hypothetical protein LOC100240756	-	2e-6	At3g23570	dienelactone hydrolase family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	2e-18	93	Arabidopsis thaliana	At2g35530	818118	bZIP transcription factor family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent, transcription, DNA-dependent, regulation of transcription;C:nucleus, chloroplast;MOPFBVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	5e-32	139	Glycine max	Gma.7264.1.A1_at	BI970370	transcription factor bZIP87	-	1e-13	At2g35530	bZIP transcription factor family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Hordeum vulgare	Contig22412_at	Contig22412	-	-	3e-4	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select
0.08	4e-18	93	Oryza sativa	Os12g0233800	U04295.1	-	Basic-leucine zipper (bZIP) transcription factordomain containing protein	1e-12	At2g35530	bZIP transcription factor family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.26	4e-48	192	Populus trichocarpa	Ptp.7892.1.A1_at	BP933525	hypothetical protein	-	2e-18	At2g35530	bZIP transcription factor family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e-1	36	Triticum aestivum	Ta.11513.1.S1_a_at	BQ170258	-	-	8e-4	At1g75388	CPuORF5 (Conserved peptide upstream open reading frame 5)	C.G.	S.X.	Please select
0.11	2e-10	65	Zea mays	Zm.1814.1.S1_at	CN844296	hypothetical protein LOC100192709	-	9e-15	At2g35530	bZIP transcription factor family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage