CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611382_at

Gene name hypothetical protein LOC100264955

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1611382_at CF212352 hypothetical protein LOC100264955 - 2e-6 At3g53850 - S.X. H.G.
0.73 90.8 1620164_at CF414117 hypothetical protein LOC100263547 - 6e+0 At5g10160 beta-hydroxyacyl-ACP dehydratase, putative S.X. H.G.
0.67 87.9 1610422_at CF215178 hypothetical protein LOC100246625 - 5e-12 At3g51670 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein S.X. H.G.
0.67 87.9 1622002_at CF513939 hypothetical protein LOC100264846 - 2e-1 At1g29951 CPuORF35 (Conserved peptide upstream open reading frame 35) S.X. H.G.
0.50 72.7 1613351_at CB972999 hypothetical protein LOC100252023 - 2e-1 At5g12970 C2 domain-containing protein S.X. H.G.
0.28 37.7 1620990_at CF511811 hypothetical protein LOC100247103 - 1e-18 At1g19330 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.3 97.2 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436382 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436405 V. riparia (VR, PI588259) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436395 V. riparia (VR, PI588259) LD, 15h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-4 46 1613413_at BQ799171 hypothetical protein LOC100261579 - 7e-2 At2g04795 unknown protein C.G. S.X.
0.02 1e-1 36 1615619_at CD715865 - - 1e+0 At4g02380 SAG21 (SENESCENCE-ASSOCIATED GENE 21) C.G. S.X.
0.02 5e-1 34 1614128_at CB916225 similar to ubiquitin carrier protein - 5e-82 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) C.G. S.X.
0.01 5e-1 34 1613353_at CA809236 hypothetical protein LOC100265492 - 4e-86 At4g01370 ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) C.G. S.X.
0.02 2e+0 32 1622650_at CD714725 - - 1e-71 At1g15290 binding C.G. S.X.
0.02 2e+0 32 1622394_at CF513308 - - 1e+0 At4g30550 glutamine amidotransferase class-I domain-containing protein C.G. S.X.
0.02 2e+0 32 1618828_at CD714725 hypothetical LOC100254354 - 1e-71 At1g15290 binding C.G. S.X.
0.02 2e+0 32 1617274_at CF372628 hypothetical protein LOC100261092 - 3e-11 At5g11580 UVB-resistance protein-related / regulator of chromosome condensation (RCC1) family protein C.G. S.X.
0.02 2e+0 32 1615479_at CA815857 hypothetical protein LOC100250632 - 2e-5 At1g26690 emp24/gp25L/p24 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 2e-6 54 Arabidopsis thaliana At3g53850 824552 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.15 1e-41 171 Glycine max Gma.8032.1.S1_at BQ629250 - - 1e-11 At3g53850 - C.G. S.X.
0.02 8e-1 34 Hordeum vulgare Contig12411_s_at Contig12411 - - 1e+0 At4g28190 ULT1 (ULTRAPETALA1) C.G. S.X.
0.07 3e-3 44 Oryza sativa Os01g0847300 AK071164.1 - - 6e+0 At5g05860 UGT76C2 C.G. S.X.
0.32 2e-28 127 Populus trichocarpa PtpAffx.206271.1.S1_at pmrna12436 hypothetical protein - 9e-41 At3g53850 - C.G. S.X.
0.13 5e-10 65 Triticum aestivum Ta.18831.2.S1_at CA593456 - - 6e-5 At5g02060 integral membrane protein, putative C.G. S.X.
0.02 7e-1 34 Zea mays Zm.9463.1.A1_at BM336991 - - 1e+0 At4g25740 40S ribosomal protein S10 (RPS10A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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