CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1611238_at

Gene name hypothetical protein LOC100263239

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1611238_at CD799234 hypothetical protein LOC100263239 - 5e-6 At1g65230 unknown protein S.X. H.G.
0.76 91.5 1622065_at CD801714 hypothetical protein LOC100240924 - 1e-27 At3g54050 fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative S.X. H.G.
0.69 88.3 1606585_at CB339560 hypothetical protein LOC100250401 - 3e-27 At1g11860 aminomethyltransferase, putative S.X. H.G.
0.69 88.3 1620292_at CA817018 hypothetical protein LOC100264686 - 3e-1 At2g45434 unknown protein S.X. H.G.
0.69 88.3 1617428_at CB344473 hypothetical protein LOC100259814 - 7e-57 At1g42970 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT) S.X. H.G.
0.65 85.0 1612645_at CB344170 hypothetical protein LOC100251062 - 2e-6 At4g09650 ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE) S.X. H.G.
0.62 83.3 1622715_s_at CA809281 hypothetical protein LOC100246378 - 3e-68 At1g12900 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) S.X. H.G.
0.56 79.4 1609310_at CB342641 hypothetical protein LOC100249576 - 2e-177 At1g56190 phosphoglycerate kinase, putative S.X. H.G.
0.49 69.3 1611476_at CB342522 hypothetical protein LOC100248815 - 1e-16 At2g46820 PSI-P (PHOTOSYSTEM I P SUBUNIT) S.X. H.G.
0.48 68.8 1618670_at BQ798857 hypothetical protein LOC100264831 - 2e-14 At5g27560 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.2 99.4 GSM147700 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 29
7.6 99.3 GSM147701 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 30
7.6 99.3 GSM147689 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 18
6.9 99.1 GSM147688 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 17
6.0 98.7 GSM147707 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 36
5.2 98.2 GSM147694 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 23
4.9 97.9 GSM147683 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 12
4.8 97.8 GSM147706 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 35
4.7 97.7 GSM147682 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 11
4.4 97.3 GSM147695 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 24
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 5e-28 123 1607753_at CA816321 hypothetical protein LOC100263239 - 1e-6 At1g65230 unknown protein C.G. S.X.
0.02 4e-1 34 1611000_at CF404521 hypothetical protein LOC100267427 - 2e-15 At1g73177 BNS (BONSAI) C.G. S.X.
0.02 2e+0 32 1621746_at CD003963 hypothetical protein LOC100261012 - 4e-4 At5g64230 unknown protein C.G. S.X.
0.02 2e+0 32 1621376_at CB004390 - - 3e-1 At5g19257 unknown protein C.G. S.X.
0.02 2e+0 32 1621139_at CB982951 hypothetical protein LOC100262947 - 3e-9 At5g08390 - C.G. S.X.
0.02 2e+0 32 1617981_at CD003963 - - 4e-4 At5g64230 unknown protein C.G. S.X.
0.01 2e+0 32 1610929_at CA818496 - - 2e-2 At4g21150 HAP6 (HAPLESS 6) C.G. S.X.
0.02 2e+0 32 1608773_at CB004390 - - 3e-1 At5g19257 unknown protein C.G. S.X.
0.02 2e+0 32 1608784_at CF518269 hypothetical protein LOC100243287 - 2e-13 At3g56210 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 5e-6 52 Arabidopsis thaliana At1g65230 842830 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB - - - C.G. S.X.
0.15 2e-12 73 Glycine max Gma.8182.1.S1_a_at CD401769 - - 5e-12 At1g65230 unknown protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEh0080L10r2_x_at HVSMEh0080L10r2 - - 6e-11 At3g54890 LHCA1 C.G. S.X.
0.02 6e-1 36 Oryza sativa Os01g0106900 AF367205.1 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase,chloroplast precursor (EC 1.1.1.267) (DXPreductoisomerase) (1-deoxyxylulose-5-phosphatereductoisomerase) 3e-81 At5g62790 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE) C.G. S.X.
0.14 4e-29 129 Populus trichocarpa PtpAffx.37259.1.A1_a_at CV276577 hypothetical protein - 1e-11 At1g65230 unknown protein C.G. S.X.
0.05 3e-1 36 Triticum aestivum Ta.14695.1.S1_at CA680229 - - 1e+0 At1g44414 unknown protein C.G. S.X.
0.02 8e+0 30 Zea mays Zm.6045.7.A1_at CK347781 hypothetical protein LOC100216946 - 3e-8 At1g18080 ATARCA C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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